Gene RPC_1369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1369 
Symbol 
ID3972465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1494745 
End bp1495248 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content63% 
IMG OID637924484 
Producthypothetical protein 
Protein accessionYP_531250 
Protein GI90422880 
COG category[S] Function unknown 
COG ID[COG3812] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTT ACGATTTCGC CGTGCCTGCC TATCTGCAAA TGCTTGGCAG CCTGTCCGCC 
AGCCTGAAAA AGGCCGCGGA CTATGCGGCC GCCAAGAAGA TCGAGCCCGC CACGCTGCTC
GGCACCAGGT TATTTCCGGA CATGCTGCCG TTGACCCGGC AAGTCCAGCT CGCCTGCGAT
TATGCCACCA AGGGCGCCGC CCGCCTGAGC GGCAGCGAAG TGCCGGTGAC GCCGGACACC
GAGACCAATT TCGAGGAGCT GCAGCAGCGC ATCGCCAAGA CCATCGCCTA CCTGCAGGGC
TTCAAGCCGG CGCAATTCGA CAGCGCCGCG ACCCGCGAGA TCACCTTCCC CAGCGGCCCG
GCCAAGACCA CGACCCTCAC CGGCCAGCAA TTCCTCAGCA ATTTTTCGCT GCCGAACTTC
TATTTCCACG TCAGCATCGC GCACGGCATC CTGCGGATGA GTGGCGTCGC GGTCGGCAAG
CACGACTTCC TCGGCGCGAA CTGA
 
Protein sequence
MSFYDFAVPA YLQMLGSLSA SLKKAADYAA AKKIEPATLL GTRLFPDMLP LTRQVQLACD 
YATKGAARLS GSEVPVTPDT ETNFEELQQR IAKTIAYLQG FKPAQFDSAA TREITFPSGP
AKTTTLTGQQ FLSNFSLPNF YFHVSIAHGI LRMSGVAVGK HDFLGAN