| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1363 |
|---|
| Symbol | |
|---|
| ID | 3972652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1487895 |
|---|
| End bp | 1488998 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637924478 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_531244 |
|---|
| Protein GI | 90422874 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.349781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCA TTGACCTCGT CGATCTCGCG CACACTTATC TCGTCGGCCC GGACCTGCCG
CCGGAGGCTT ACGCGCTGAA GCCGGTGTCG ATGACCTGGC GGCAGGGCGG CGCCTACGCG
CTGCTCGGGC CATCGGGCTG CGGCAAGACC ACGCTGCTCA ATCTGATCTC CGGCATCGTC
ACGCCGTCGC ACGGCCAGAT CCTGTTCGAC GGCACCGACG TCACCCGGCT CTCGACCCGC
GAGCGCAACA TCGCCCAGGT GTTCCAGTTT CCGGTGATCT ACGACACCAT GACGGTGGGG
CAGAATCTGG CGTTTCCGCT GAAGAACCGC GGCGTGGCGA AAGCCGACAT CGACAAGCGC
GTCGCCGAGA TCGCCGAACT GCTCGATCTT ACCCCGCATC TCAAGCGCAA GGCGACGCGA
CTCACCGCCG ACGCCAAGCA GAAGATTTCG CTGGGCCGCG GCCTGGTGCG CTCAGACGTC
TCGGCGATCC TGTTCGACGA GCCGCTCACC GTGATCGATC CGCATCTGAA ATGGGAGCTG
CGCTCCAAGT TGAAGGCGCT GCACCGCGCG CTGGATCTCA CCATGATCTA CGTCACCCAC
GACCAGACCG AAGCTTTGAC CTTTGCCGAC ACCGTGGTGG TGATGCATGA CGGACGCGTG
GTGCAGAGCG GCACGCCGGA GGAATTGTTC GAAAAGCCGG CGCACACCTT CGTCGGCTAT
TTCATCGGCT CGCCCGGCAT GAACGTGGTG CCGGCGCAAG TGCGCGGCCG CGAGGCCAAG
ATCGGCGGCC ACGTCATCCC GCTCGGCCGC GCTTACGATC ATCTGCCGCA AGGCGCCAAG
ATCGAGATCG GCGTGCGGCC GGAATTCGTC CATGTCGCGC CGCTGGCGCC GGGCTTGCTT
GCAGCCACGA TCGAGCGGAT CGACGATCTC GGAAGGGTGC GGTTTGCAAG GGTGCGGGTC
GGCGACGTGA AGTTCGCGGC GCGGCTGCCG CCCGGACTTT CGGAGCCAGG CTCGGAAGTC
GGGCTGGTGT TCGAGCCGGC GCGGATCCTG GTCTATGCCG ATAGCCGCCT GGTCGAAGGC
CAGGCGTTGG AGAAGGTGGC CTGA
|
|---|
| Protein sequence | MARIDLVDLA HTYLVGPDLP PEAYALKPVS MTWRQGGAYA LLGPSGCGKT TLLNLISGIV
TPSHGQILFD GTDVTRLSTR ERNIAQVFQF PVIYDTMTVG QNLAFPLKNR GVAKADIDKR
VAEIAELLDL TPHLKRKATR LTADAKQKIS LGRGLVRSDV SAILFDEPLT VIDPHLKWEL
RSKLKALHRA LDLTMIYVTH DQTEALTFAD TVVVMHDGRV VQSGTPEELF EKPAHTFVGY
FIGSPGMNVV PAQVRGREAK IGGHVIPLGR AYDHLPQGAK IEIGVRPEFV HVAPLAPGLL
AATIERIDDL GRVRFARVRV GDVKFAARLP PGLSEPGSEV GLVFEPARIL VYADSRLVEG
QALEKVA
|
|---|
| |