| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1347 |
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| Symbol | |
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| ID | 3972636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1468558 |
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| End bp | 1469400 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924462 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_531228 |
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| Protein GI | 90422858 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0986421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTG TGCGATTTGG CACGCTCGGC CAGGAGAAGC CCGGACTGAT CGACGGCTCC
GGCCAATTGC GGGATCTGTC GGCGCATCTG CCCGACCTCG CCGGCGACGC CTTTGCGCCG
TCATCGCTGG CCAAGCTCGC GAAGCTCGAC GTCGAAAGCC TGCCGATGGT CTCCGGCCAG
CCGCGGATCG GCGCGCCGGT CGGCGGATCG CCGAAATTCA TCGCCATCGG CCTGAACTAT
GCCGACCACG CAGCTGAAGC CGGGATGGCG ATCCCGTCGG AGCCGGTGGT GTTCACCAAG
GCCAACAGCT CGCTGTGCGG CCCCAACGAC GCGGTGGAAA AGCCGCGCGG CTCGACCAAG
CTCGATTGGG AGGTCGAACT CGCCGTGGTG ATCGGCACGC GCGCCAAATA TGTCAGCGAG
GCCGAGGCGC TTGATTATGT CGCCGGCTAC GCGGTGTGCA ACGACGTCTC CGAGCGCGCC
TTCCAGCTGG AGCGGCTCGG GCAATGGACC AAGGGCAAAT CGCACGACAC CTTCGGCCCG
CTGGGGCCAT GGCTGGTGAC CAAGGACGAG ATCGCCGACG TGCACAGCCT GCCAATGTGG
CTCGACGTCA ATGGTGAGCG CTGCCAGACC GGCTCGACGG CGACCATGAT TTTCAACGTG
CCGAAGATCG TCTCCTATCT GTCGGAAATC ATGACGCTCA ACCCCGGCGA CATCATCACC
ACCGGCACCC CGCCCGGCGT CGGCATGGGC ATGAAGCCGC CGAAATTCCT GCAGGTCGGC
GACGTGGTGA CGCTCGGTAT CGAAGGCCTC GGCGAACAGC GCCAGGAGAT CGTCGCGGCG
TGA
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| Protein sequence | MKLVRFGTLG QEKPGLIDGS GQLRDLSAHL PDLAGDAFAP SSLAKLAKLD VESLPMVSGQ
PRIGAPVGGS PKFIAIGLNY ADHAAEAGMA IPSEPVVFTK ANSSLCGPND AVEKPRGSTK
LDWEVELAVV IGTRAKYVSE AEALDYVAGY AVCNDVSERA FQLERLGQWT KGKSHDTFGP
LGPWLVTKDE IADVHSLPMW LDVNGERCQT GSTATMIFNV PKIVSYLSEI MTLNPGDIIT
TGTPPGVGMG MKPPKFLQVG DVVTLGIEGL GEQRQEIVAA
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