Gene RPC_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1342 
Symbol 
ID3973820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1464772 
End bp1465872 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content69% 
IMG OID637924457 
Productglycosyl transferase, group 1 
Protein accessionYP_531223 
Protein GI90422853 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTTA CGCTAGCTGT TTTCCAGCTC GATAAGCTCG GCGGCAAGGA ACGCGACAGT 
CTCGCCGTGG CGCGCTTTTT GGCAGCGCGT GGCCATGCGG TGACCGTGCT GACGAGCTCG
GCGCCCGCCG CGCCGGAGCA GCAGGTCCAA GTTCTGGTAC TGCCGATCAA GGGCGCCAGC
AATCATGCGC GCACCACGTC GTTCGCCGCC GCGGTCCGCG CCCATCACGC CGCCGCGGCT
GGCGATGCGC TGTTGGCGTT CGATCGGGTG CCCGGCGCGG ATGTCTTCTT CGCCGCGGAT
CCGAGCTACA CGCTGCGCTA TTCCGGCCTG ACCTCGTGGT TGTTGCCGCG CCGACGTGCC
ATGCTGGCGT TGGAGCGCGG CCTGTTCGAC GTCACCGCGA AGTCACACAT CTTCTTTCTC
ACCGCCCGGC AGCGCGACGA GTATCGCGCG GCGTACCGCT TGGATCCCGC CCGCGCGACC
ATCCTGCCGC TGATCCTGCA CGAGGAGCGC TACGTCGCCG TCGCAGCACG CGACGACAAA
GCGGAGATTC GCGCGCGGCT CGGCTTGGCG GGCGACGCCG TGGTCGCGCT GTGCATCGGG
ATTCCGGCCA AACGCAAGGG GTTCGACCGC GCGCTCGAAG CGCTGGCGGC GCATCCCAAG
CTGCAATTGA TCTTGGCGGG GTCTTCCGAT CGCTGGATCG AACCGCGGGT TGCGCAACTC
GGGTTGCAAG ACCGGGTGCG GGTGCTGCCT TATGGCGCCG ACGTGGTGGA TCTGCTGTCG
GCTGCCGACG TGTTCCTGCA TCCGGCGCGC GAGGAAGCCG CCGGCGTCGT ACTCGGCGAG
GCTTTGCTCG CCGGCACGCC GGTCATCGTG TCGGGGGTCT GCGGCTACGC GCCGGAGATC
GCGCGCTGCC GCGCCGGAAT CGTGCTGCCC GAACCGTTTG AGACGGCGGC TTTGGTGCGC
GCGATCGGCG AGGTCCTCGG GCAGCTGCCG GCGTTCCGGC AGGCCGCGGA AGCCGAATCG
GCGCGGCTGC AGCAGGTCCG CGGCGATTGG CTGACCACCA TTGCCGACAA GGTCGAAGCT
CAGGCCCCGC GCGCCGGCTA G
 
Protein sequence
MRVTLAVFQL DKLGGKERDS LAVARFLAAR GHAVTVLTSS APAAPEQQVQ VLVLPIKGAS 
NHARTTSFAA AVRAHHAAAA GDALLAFDRV PGADVFFAAD PSYTLRYSGL TSWLLPRRRA
MLALERGLFD VTAKSHIFFL TARQRDEYRA AYRLDPARAT ILPLILHEER YVAVAARDDK
AEIRARLGLA GDAVVALCIG IPAKRKGFDR ALEALAAHPK LQLILAGSSD RWIEPRVAQL
GLQDRVRVLP YGADVVDLLS AADVFLHPAR EEAAGVVLGE ALLAGTPVIV SGVCGYAPEI
ARCRAGIVLP EPFETAALVR AIGEVLGQLP AFRQAAEAES ARLQQVRGDW LTTIADKVEA
QAPRAG