Gene RPC_1335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1335 
Symbol 
ID3973808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1452592 
End bp1453089 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID637924445 
Producthypothetical protein 
Protein accessionYP_531216 
Protein GI90422846 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.352128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTCA AGCGCATCGG CAAACATCTT TGGGCCAACC GCTCGCGGGT GCAGAAGGCA 
TTCCCGCCGC AGACGCTCGA CGCCATCGAA CAGGCGATCC GGGCTTGCGA GGCGTCGCAT
GCCGGGCAGA TTCGCTTCGT GGTCGAAGGC GCGCTCGACG GCGCGCCGCT GTTTCGCGAC
CAGCCGGCCC GCGAACGCGC GCTCGACGTG TTTTCGCAAC TGCGGGTCTG GGACACCGAC
CGCAACAACG GCGTGCTGAT CTACGTGTTG CTGGCCGACC GCGACGTCGA GATCATCGCC
GACCGCGGCA TCGACGCCAA AGTCGGCGCT GCGGAGTGGG AAGCGATCTG CCAGGCGATC
GAAGCCGAGT TTCGCGACGG CCGCTTCGAA CAGGGCGCCA TCAACGGCAT CAAGGCGATC
GGCCGGCATC TGGCGCGGCA TTTCCCGGGC GACGCCTCCG ACGCCAACGA ATTGCCCGAC
GGCCCGGTGG TGATCTAG
 
Protein sequence
MGLKRIGKHL WANRSRVQKA FPPQTLDAIE QAIRACEASH AGQIRFVVEG ALDGAPLFRD 
QPARERALDV FSQLRVWDTD RNNGVLIYVL LADRDVEIIA DRGIDAKVGA AEWEAICQAI
EAEFRDGRFE QGAINGIKAI GRHLARHFPG DASDANELPD GPVVI