Gene RPC_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1317 
Symbol 
ID3974056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1434612 
End bp1435313 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID637924427 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_531198 
Protein GI90422828 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.615277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.153656 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTGG CCAACTATCT CGAACGGCGT GGTGAACTGA AGACCTATTT CGACCGCACC 
GCGGCCGACA ATTGGGCTCG TCTCACCTCC GACGCCCCGG TCAGCGGCAT CCGCGCCACG
GTGCGCGCCG GGCGCGATGA GATGCGCAAC ACGTTGCTAT CATGGCTGCC GGCGAACATG
ACCGGGATGC GGCTGCTTGA TGCCGGATGC GGCACCGGTG CGCTGTCGAT CGAAGTCGCG
CGCCGCGGTG CGCATGTCGT CGCCATCGAC CTGTCGCCGA CGCTGGTCGA GGTCGCGCGG
GAACGCATCC CGGCCGACGT CGATCCGGCC CTGATCGATT TCCGCTCCGG CGACATGCTC
GATCCCAAGG CCGGCGAATT CGACTTCGTG GTGGCGATGG ATTCGCTGAT CCATTACCTG
CCGGCGGATA TCTGCAAGAT CATGGCCGGG CTCGCCGCCC GCACCAGCCA GGCGATGCTG
GTGACCTTCG CGCCGAAGAC GCCGGCATTG GCGCTGATGC ATTTCGTCGG CGGCTTCTTC
CCGCGCGGCG ATCGCGCCCC GGCGATCGAG CCGGTGGCTG AACAGAAACT CCGCAAGCTG
CTCACCGCCG ATCCGGCGCT GCAGCAATGG CAGATCGGCC GCACGCATCG CGTCGCGCGC
GGCTTCTACA CCTCGCAGGC TTTGGAGATG ATCCGTCGAT GA
 
Protein sequence
MPVANYLERR GELKTYFDRT AADNWARLTS DAPVSGIRAT VRAGRDEMRN TLLSWLPANM 
TGMRLLDAGC GTGALSIEVA RRGAHVVAID LSPTLVEVAR ERIPADVDPA LIDFRSGDML
DPKAGEFDFV VAMDSLIHYL PADICKIMAG LAARTSQAML VTFAPKTPAL ALMHFVGGFF
PRGDRAPAIE PVAEQKLRKL LTADPALQQW QIGRTHRVAR GFYTSQALEM IRR