Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1317 |
Symbol | |
ID | 3974056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1434612 |
End bp | 1435313 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924427 |
Product | Mg-protoporphyrin IX methyl transferase |
Protein accession | YP_531198 |
Protein GI | 90422828 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | [TIGR02021] magnesium protoporphyrin O-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.615277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.153656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTGG CCAACTATCT CGAACGGCGT GGTGAACTGA AGACCTATTT CGACCGCACC GCGGCCGACA ATTGGGCTCG TCTCACCTCC GACGCCCCGG TCAGCGGCAT CCGCGCCACG GTGCGCGCCG GGCGCGATGA GATGCGCAAC ACGTTGCTAT CATGGCTGCC GGCGAACATG ACCGGGATGC GGCTGCTTGA TGCCGGATGC GGCACCGGTG CGCTGTCGAT CGAAGTCGCG CGCCGCGGTG CGCATGTCGT CGCCATCGAC CTGTCGCCGA CGCTGGTCGA GGTCGCGCGG GAACGCATCC CGGCCGACGT CGATCCGGCC CTGATCGATT TCCGCTCCGG CGACATGCTC GATCCCAAGG CCGGCGAATT CGACTTCGTG GTGGCGATGG ATTCGCTGAT CCATTACCTG CCGGCGGATA TCTGCAAGAT CATGGCCGGG CTCGCCGCCC GCACCAGCCA GGCGATGCTG GTGACCTTCG CGCCGAAGAC GCCGGCATTG GCGCTGATGC ATTTCGTCGG CGGCTTCTTC CCGCGCGGCG ATCGCGCCCC GGCGATCGAG CCGGTGGCTG AACAGAAACT CCGCAAGCTG CTCACCGCCG ATCCGGCGCT GCAGCAATGG CAGATCGGCC GCACGCATCG CGTCGCGCGC GGCTTCTACA CCTCGCAGGC TTTGGAGATG ATCCGTCGAT GA
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Protein sequence | MPVANYLERR GELKTYFDRT AADNWARLTS DAPVSGIRAT VRAGRDEMRN TLLSWLPANM TGMRLLDAGC GTGALSIEVA RRGAHVVAID LSPTLVEVAR ERIPADVDPA LIDFRSGDML DPKAGEFDFV VAMDSLIHYL PADICKIMAG LAARTSQAML VTFAPKTPAL ALMHFVGGFF PRGDRAPAIE PVAEQKLRKL LTADPALQQW QIGRTHRVAR GFYTSQALEM IRR
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