| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1314 |
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| Symbol | |
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| ID | 3972516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1428367 |
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| End bp | 1429959 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924424 |
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| Product | light-independent protochlorophyllide reductase subunit B |
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| Protein accession | YP_531195 |
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| Protein GI | 90422825 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.190808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTGA CAGTTTGGAC ATATGAGGGG CCTCCCCATG TCGGCGCGAT GCGCGTCGCC
ACGGGTATGG AAGGCCTGCA CTACGTGCTG CATGCGCCGC AGGGCGACAC CTACGCCGAC
CTGTTGTTCA CCATGATCGA GCGCCGCGAT CGTCGCCCGC CGGTGACCTA CACGACGTTT
GCGGCGCGCG ACCTCGGCGG CGACACTGCC GAACTGTTCA AGACCGCGGT GCAGAATGCC
TATGAGCGGT TCCGGCCGCA GGCGATGATC GTCGGCGCGT CCTGCACCGG CTCGTTGATC
CAGGACGATC CGGGCGGTCT GGCGAAGGGC ATGGGGTTGC CGGTCCCGGT GATCGCCATC
GATCTGCCGG CCTATCAGCG CAAAGAGAAC TGGGGCGCGG CCGAAACCTT CTATCAGCTG
GTCCGCGCGT TGGCGGGGCC GTCGGCGCCG CCGCCCGGCA GCAAGCGCCC CGAGCGCGCG
CCCGGCGTTC GCCCGAAGTG CAACATTCTC GGGCCGACCG CGCTCGGTTT CCGGCATCGC
GACGACGTGA TCGAAATCAC CGCGCTGCTC GGCAAGCTCG GCATCGACGT CAACGTCACC
GCGCCGATGG GGGCGACCCC GGCCGACCTG ACGCGATTGG GCGAAGCCGA CTTCAACGTC
GTGCTGTACC CGGAAATCGC CTCGCAGGCG GCGTCCTGGC TGCATCGGAT CTTCCACCAG
CCGTTCACCA AGACGATCCC GATCGGCGTC TCGGCGACCC GCGAATTCAT CGAGGAAGTG
GCCGCGTTGG CCGGCGTCGA CGCGGCGCCG GTGTTGAAAG CCAATTCCAG TCGGCTGACC
TGGTTCTCGC ATTCGGTCGA CTCGACCTAT CTCACCGGCA AGCGGGTGTT CATCTTCGGC
GATGCCACCC ACGTCGTCGC CGCGGCGCGG ATTGCGTCCG ATGAAATCGG CTTCAAGGTG
GTCGGCATCG GCACCTACAG CCGCGAGTTC GGCCGCGAGA TCCGCGAGGC CGCCAAGCTC
TACGACGTCG AGCCGCTGAT CACCGACGAT TACCTCGAGG TCGAGGCGCA TATCGCCGAG
CTGCAGGTCG AGCTGGTGCT CGGCACCCAG ATGGAGCGCC ATATCTCCAA GCGCCTCGGC
GTGCCCTGCG CGGTGATCTC GGCGCCGGTG CATATCCAGG ATTACCCCGC GCGCTACGCC
CCGCAGATGG GTTTCGAAGG CGCCAACGTG ATCTTCGACA CCTGGGTGCA TCCGTTGATG
ATGGGCCTCG AAGAGCATCT GTTGGCGATG TTCAAGGACG ATTTCGAATT CAAGGACGGC
GCGGTGCCGT CGCATCTCGG CGTCGGCCAT TCGGCGCCCG CGGTGCAGAC CGCGTCGTCC
GAGCCGCAGC CATCAGCCAT CGAGACGCCG AGCGCCGCAG CGACCGAGAC CGCGGCGGTC
TGGGCTGCCG ATGCGGAAAA AGAACTCCGC AAGATCCCGT TCTTTGTTCG CGGAAAGGCC
CGCCGTAATA CCGAGCGATT CGCCAACGAA AATGGCGTCG CCACCATAAC CGTCGAGACA
TTGTACGATG CCAAAGCGCA CTTCTCCCGC TGA
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| Protein sequence | MQLTVWTYEG PPHVGAMRVA TGMEGLHYVL HAPQGDTYAD LLFTMIERRD RRPPVTYTTF
AARDLGGDTA ELFKTAVQNA YERFRPQAMI VGASCTGSLI QDDPGGLAKG MGLPVPVIAI
DLPAYQRKEN WGAAETFYQL VRALAGPSAP PPGSKRPERA PGVRPKCNIL GPTALGFRHR
DDVIEITALL GKLGIDVNVT APMGATPADL TRLGEADFNV VLYPEIASQA ASWLHRIFHQ
PFTKTIPIGV SATREFIEEV AALAGVDAAP VLKANSSRLT WFSHSVDSTY LTGKRVFIFG
DATHVVAAAR IASDEIGFKV VGIGTYSREF GREIREAAKL YDVEPLITDD YLEVEAHIAE
LQVELVLGTQ MERHISKRLG VPCAVISAPV HIQDYPARYA PQMGFEGANV IFDTWVHPLM
MGLEEHLLAM FKDDFEFKDG AVPSHLGVGH SAPAVQTASS EPQPSAIETP SAAATETAAV
WAADAEKELR KIPFFVRGKA RRNTERFANE NGVATITVET LYDAKAHFSR
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