| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1301 |
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| Symbol | |
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| ID | 3972503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1414532 |
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| End bp | 1415959 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924411 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_531182 |
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| Protein GI | 90422812 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02040] transcriptional regulator PpsR |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAAAT CTCCGAAGGA GTCGCTGGGA GATCTCGGTG CACTTTCTGC TGCCAAGTTG
ATTGCCGCTG CGACGGATGT CGCCTTGGTG GTCGACGGAC ACGGCGTGAT TCTCGACGTG
GCGTTCAACA AGGACGAATT GGCTCTCGAA TTGGACGGCC AGGGGCGCTG GCTGGGCGCG
AAATTGGCCG ACGTCGTCAC CTCCGATACC CAGATGAAAG TCAGGGAGCT GCTGCAGGAC
GCCGCGGAGC GCGGGACCTC AAGCTGGCGG CAGGTCAACC ATCCCTCGCC CGGCGGCGAG
GACGTTCCGG TGCTTTATTC GGCGGTGGAC TACGGCCGGG GCAACCGGCT GGTGGTGATG
GGCCGCGACC TGCGGCAACT CGCCGTGATG CAGCGTCGTT TGGTCAACGC CCAGCAGTCG
ATGGAGCGCG ACTACATCAA GCTGCGGCAC GCCGAAACCC GCTATCGCCT CTTGTTTCAG
GTCTCTTCGG AGGCGGTCAT GATCGTTGAC TCCAGCAGCG AGACGATCAT CGACGCCAAT
CCGGCGGCGC TGGCGCTGTT CGATCAAAGC GCGCCGCAGA TGTTGAATTC GTCTTTTCCC
AGCCATTTCA ACGGCGCCAG CTCGCAGGCC ATCTCCAATC TGCTGGCCGA CGTCCGCGCC
ACCGGCCGCG ACAATCGGGC CCGCGTTCAC GCCGCGAACG GCCCGCGCGA TTGCGACGTC
TCGGTGTCGT TGTTCAGGCA GGAAAATTCG ACGCTGTTCT TGATCCGATT GTCGTCCTAT
TCGACGATGC CGGAAGCCGG CGGCTTGAAG GCCACGGCGA TGCTGCTGAA TTTCTTCGAA
TCCGCCGCCG ATGGTCTGGT CATCACCCAG TATGACGGCC GGATCGTGAA GGCCAACCTT
GCATTTCTGG AGATGGCGCA GCTGGGAAAT GCCGAGCAGT CCCGCGGCGA ATCGCTGGAT
CGCTGGCTCG GGCGCACTGG CGTCGATTTC AGCGTGGCCT TGGCCAATCT GCGGCAGAGC
GGATCGATCA AGCTGTTCAC CACGGTGTTG CGCGGCGAAT ACGGCGCCAC CGCCGAGGTC
GAGGTGTCGG CAATGTCGCT CACCGACAGC GAGGACAAGC CGAGTTTCGG CTTCGCGATC
CGCAACGTCG AAAAGCGGCT ATCGGCCGCC ACCACCTCAA AGCGCGAGTT GCCGCGCTCG
GTGGCGCAGC TCACCGAACT GATCGGCCGC GTGCCGCTGC GCGATCTGGT GCGGGAGACC
ACGGACGTGA TCGAGAAGCT GTCGATCGAG GCGGCGCTGG AATTGACCGG CGACAATCGC
GCGTCGGCGG CTGATATGCT CGGCCTCAGC CGGCAGAGTC TTTACGTGAA ATTGCGGCGT
TACGGCCTCG CCGAACACGC GCCGGAAGGT GAGGGCGCCA ATGACTAA
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| Protein sequence | MFKSPKESLG DLGALSAAKL IAAATDVALV VDGHGVILDV AFNKDELALE LDGQGRWLGA
KLADVVTSDT QMKVRELLQD AAERGTSSWR QVNHPSPGGE DVPVLYSAVD YGRGNRLVVM
GRDLRQLAVM QRRLVNAQQS MERDYIKLRH AETRYRLLFQ VSSEAVMIVD SSSETIIDAN
PAALALFDQS APQMLNSSFP SHFNGASSQA ISNLLADVRA TGRDNRARVH AANGPRDCDV
SVSLFRQENS TLFLIRLSSY STMPEAGGLK ATAMLLNFFE SAADGLVITQ YDGRIVKANL
AFLEMAQLGN AEQSRGESLD RWLGRTGVDF SVALANLRQS GSIKLFTTVL RGEYGATAEV
EVSAMSLTDS EDKPSFGFAI RNVEKRLSAA TTSKRELPRS VAQLTELIGR VPLRDLVRET
TDVIEKLSIE AALELTGDNR ASAADMLGLS RQSLYVKLRR YGLAEHAPEG EGAND
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