| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1292 |
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| Symbol | |
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| ID | 3974010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1406563 |
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| End bp | 1407501 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924402 |
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| Product | chlorophyll synthesis pathway protein BchC |
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| Protein accession | YP_531173 |
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| Protein GI | 90422803 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.557633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACCA TCGCGGTAGT GCTGAAGCAG CCGAAACATG TTGAAGTCAA TCGGCTGGCT
TTAACGGCTC CGACTGTCGA CGATGTCGTC GTCGATGTGG CCTGGAGCGG GGTCAGTACC
GGTACGGAGC GTCTGCTCTG GTCGGGCCGC ATGCCGTCGT TTCCCGGAAT GGGCTACCCG
CTGGTCCCCG GCTACGAGTC GGTCGGCGAG GTGGTGGAAG CTGGTTCGGC GACCGACTTG
CGTCCCGGCC AAATGGTGTT CGTGCCCGGC GCAAAGTGCT TCGGCGAAGT TCGCGGCCTG
TTCGGCGCCT CGGCGTCCCG GCTTGTTGTC CCAGCGAAGC GCGTCATCGC GCTCGATCAG
AGCCTGGGTG AGCGCGGAAT TCTGCTGGCG CTGGCGGCGA CGGCCTATCA CGCCATCGCG
GCGCGCGGCG GACGCCCGCC CGAATGCATT GTCGGCCACG GCGTACTTGG CCGCTTGTTG
GCGCGGATCG CCGTTGCGCT CGGCAATCCG CCGCCGGTGG TGTGGGAAAA GAACCCAGTC
CGCGCTGGCG GCGCCGACGG ATATAGCGTC ATCGATCCCG CGGACGACGC CCGGCGGGAC
TACCAAAGCA TCTACGACGT CAGCGGCGAT CCGACATTGT TGGACTCTTT GATTTCGCGC
ATCGCGGCGG GCGGAGAAAT CGTGCTGGCT GGTTTTTATA GCGATCCTTT GTCGTTCGCG
TTTCCGCCGG CATTCATGCG CGAGGCCCGG ATCCGGGTCG CCGCCGAATG GCAGCCGCCG
GATATCGCGG CGACCAAGGA CTTGATCGAA ACAGGGCGGC TTTCGCTCGA TGGATTGATT
ACGCATCACC ATGACGCGAA AGCCGCGCCG GATGCCTACC GGATCGCTTT TGAAGATGCT
GCATGTCTGA AGATGGTTTT GAACTGGAGA TTGAGCTGA
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| Protein sequence | METIAVVLKQ PKHVEVNRLA LTAPTVDDVV VDVAWSGVST GTERLLWSGR MPSFPGMGYP
LVPGYESVGE VVEAGSATDL RPGQMVFVPG AKCFGEVRGL FGASASRLVV PAKRVIALDQ
SLGERGILLA LAATAYHAIA ARGGRPPECI VGHGVLGRLL ARIAVALGNP PPVVWEKNPV
RAGGADGYSV IDPADDARRD YQSIYDVSGD PTLLDSLISR IAAGGEIVLA GFYSDPLSFA
FPPAFMREAR IRVAAEWQPP DIAATKDLIE TGRLSLDGLI THHHDAKAAP DAYRIAFEDA
ACLKMVLNWR LS
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