| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1283 |
|---|
| Symbol | |
|---|
| ID | 3974001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1397225 |
|---|
| End bp | 1398106 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637924393 |
|---|
| Product | phosphonate metabolism PhnJ |
|---|
| Protein accession | YP_531164 |
|---|
| Protein GI | 90422794 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3627] Uncharacterized enzyme of phosphonate metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGC CGACGTATAA TTTCGCCTAT CTCGACGAAG GCACCAAGCG GATGATCCGC
CGCGCCATCC TGAAGGCGAT CGCGATCCCC GGCTATCAGG TGCCGTTCGC CAGCCGCGAA
ATGCCGATGC CCTATGGCTG GGGCACCGGC GGCGTGCAGG TGACCGCCGC GATCCTCGGC
CCGCAGGATG TGTTGAAGGT GATCGACCAG GGCTCGGACG ACACCACCAA CGCGATCTCG
ATCCGCAAGT TCTTCGCCAA GACCGCGGGC GTCGCCACCA CCACGCGCAC CGAAGAAGCC
AGCGTGATCC AGACCCGGCA CCGGATTCCG GAAGCGCCGC TGCATGCCGG GCAAGTGCTG
GTGTATCAAG TGCCGATCCC GGAGCCGCTG CGCTACCTCG AGCCGCGCGA GACCGAGACG
CGGCGGATGC ACGCGCTCGG CGAATACGGG TTGATGCATG TGAAGCTCTA TGAAGACATC
GCCAAGTTCG GCCACATCGC CACCGCCTAT GCGTATCCGG TGAAAGTGGC GGGGCGCTAC
GTGATGGACC CGTCGCCGAC GCCGAAATTC GACAATCCGA AGATGAATGA TTGCGAGGCG
CTGCAATTGT TCGGCGCCGG CCGCGAGAAG CGGATCTACG CAATTCCGCC TTATACGCAG
GTGGTGTCGC TGGATTTCGA GGATCACCCG TTCACCCGCT ATCGCCAGGA CGCGCCGTGC
GCGCTGTGCG GCGCGGAGGA TTCCTATCTC GATGAAATCG TCACCGACGA TCAGGGCAGC
CGGATGTTCG TCTGCTCCGA CACCGATTAT TGCGAGACCC GGCAGCGCGA CGGTCATGTC
GGCAGCGAAA GTGCGCCGAA CAAGGAGCAC GCCCATGACT GA
|
|---|
| Protein sequence | MNAPTYNFAY LDEGTKRMIR RAILKAIAIP GYQVPFASRE MPMPYGWGTG GVQVTAAILG
PQDVLKVIDQ GSDDTTNAIS IRKFFAKTAG VATTTRTEEA SVIQTRHRIP EAPLHAGQVL
VYQVPIPEPL RYLEPRETET RRMHALGEYG LMHVKLYEDI AKFGHIATAY AYPVKVAGRY
VMDPSPTPKF DNPKMNDCEA LQLFGAGREK RIYAIPPYTQ VVSLDFEDHP FTRYRQDAPC
ALCGAEDSYL DEIVTDDQGS RMFVCSDTDY CETRQRDGHV GSESAPNKEH AHD
|
|---|
| |