Gene RPC_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1278 
Symbol 
ID3973996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1392694 
End bp1393737 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content68% 
IMG OID637924388 
ProductMg2+ transporter protein, CorA-like 
Protein accessionYP_531159 
Protein GI90422789 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0707161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCCG ACGTTCCTGA CGCGCAACGA CTTCCGATCG ATCCCGAGCT GCCGCTGCTG 
GCGCCGCCGC AGCCGATTCC TGGGCTGGTG TGGGCGTTCC GGATCGACGC CGACGGCCGC
CCGCAAGCGC TGCCGGTGGA CCGGCCGATC GAGACGGCGC AGGACGGCTT GCTGTGGCTG
CATTTCAACC TGACCGATGC GCGGGCGCTG CAATGGCTCG GCTCCGCGGC GCCGGCGCTG
CCCGAGGAGG CCCGGGCGCT GCTGCTGTCG AAAGACACCT ATCAGCAACT GCACGCCAGC
GACGACGGCG CCTATGGGGT GATCGCCGAC CTGTTGCGCG AGATCGGCGG CGCCACCGAA
GACACCGGCT ATCTGCGCTT CGTGATGAGC GAGCATCTGC TGATCAGCGG CCGGCATCGC
GCGCTGTGCG CCGCCGACGC CACCCGGCGG GCGCTGGAAA ACGGCTGCCG GATCGACAGC
GTGGCGGAGC TGTTCGAAAC CATCGTCGAG AACGTCGCCG CCACCATGGA GCGGGTGATC
GACCGGCTCG CCGAGGCGCT CGACGACATC GAGGAAGAGG TGCTGTCGGA GGAGGAAGCC
GATCTGCGCA AAGGCCTCGG CCAGGTGCGG CGGACCTGCG TGCGGCTGCA TCGGCAATTG
TCCGGCCTGC AGCAGCTGTT CCATCGGCTG GAGGAGAAGG ACACCTCCGG GCTGAAGCCG
GCGCTGCAGA TCGCCGCCGG CAAATTGGCG CAGCGGCTCG ACGGCCTCGA CCGCACCATC
ATCGAGATGC GCGACCGCAG CCGGCTGTTG CAGGAAGAGC TGCAGCTGAA GATCGAGGAA
CAGGGCAACA ACAGCCTGCG GGTGCTGTCG GTGTTGACCG CGCTGTTGAT GCCGCCGACC
CTGGTCACCG GGATCTTCGG CATGAACAGC AGGGGATTGC CGTTTGCCGA CAGCGACGCC
GGGTTCTGGT GGGCGGCGGC GCTGATCTGC ATGGCGTCGC TCGCCGCTTA TCTGATCCTG
CGGCGGATCG GCATCATCCG GTAG
 
Protein sequence
MQSDVPDAQR LPIDPELPLL APPQPIPGLV WAFRIDADGR PQALPVDRPI ETAQDGLLWL 
HFNLTDARAL QWLGSAAPAL PEEARALLLS KDTYQQLHAS DDGAYGVIAD LLREIGGATE
DTGYLRFVMS EHLLISGRHR ALCAADATRR ALENGCRIDS VAELFETIVE NVAATMERVI
DRLAEALDDI EEEVLSEEEA DLRKGLGQVR RTCVRLHRQL SGLQQLFHRL EEKDTSGLKP
ALQIAAGKLA QRLDGLDRTI IEMRDRSRLL QEELQLKIEE QGNNSLRVLS VLTALLMPPT
LVTGIFGMNS RGLPFADSDA GFWWAAALIC MASLAAYLIL RRIGIIR