| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1270 |
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| Symbol | |
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| ID | 3973028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1385758 |
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| End bp | 1386843 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637924380 |
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| Product | ABC transporter related |
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| Protein accession | YP_531151 |
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| Protein GI | 90422781 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.117767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.658587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGA TCGATGGCCA CGGTTCGGCG GTGCGGGTCG AAGCCTGCGG CAAGACCTTC
ACCGACGGCA CCCGCGCCTT GCTGCCGGCG ACGCTCGACA TCGCCCGCGG CGAAACCTTG
GTGCTGCTCG GACCAAGCGG CTGCGGCAAG ACCACGATGC TGCGGATCAT CGCCGGGCTG
GAGCAGCCCG ACGCCGGCGG CCGGGTGCTG TTCGACGGCG CCGACATGAC CCGCGTGCCG
ATCGAGCAGC GCAATGTCGG CATGGTGTTT CAGTCCTACG CGCTGTTTCC CAATATGAGC
GTCGCCGACA ATATCGGCTA CGGCCTGAAG ATCCGCGGCG TCGGCAAGGC CGAGCGCGCG
GCGCGGATCG CCGAACTGGT GGCGCTGACC AATATCGGCG GGCTGGAAAA TCGCCGCATC
GAGCAGCTCT CCGGCGGCCA GCGGCAGCGC GTCGCGCTGG CCCGCGCGGT CGCCATTCGC
CCCGGCATCC TGTTGCTGGA CGAACCGTTG ACCGCGCTCG ACGCCGCGCT GCGCGACCGG
CTGCGCGGCG AACTCAACCG CCTGCTGCGC TCGCTGGGCA TCACCGCGAT CTACGTCACC
CACGACCAGG CCGAGGCGAT GGAGCTCGGC GACCGCATCG TGGTGATGCG CCACGGCGCG
ATCGCGCAGA TCGGCACGCC GCGCGAGATC TATTTCGCGC CGCAGAGCCG CTTCGTCGCC
GAATTCGTCG GCGCCGCCAA CATCATCGAG GGCGCGGTCG ATAACGGGCT GCTGCAGCTA
CCGGGCGGCT CGGTCGCGGT CGCCGCTTCC GGGATGCGCG CCGCCGCGGT GGCGATGATC
CGCCCGGAGA CCATCCGGAT CGTCGATCCG GCGCAAGCCG CGCTCACCGG CATCGTCGAC
AGCGTCGCCT TCGTCGGCGA TCGACAGCGC ATCGTGGTGC GCGGCGCGGC CGACAAGCCG
CTGGCGATCG ACGCGCCGAA CACGATCGAG GTGAAGTGCG GCGAGCGGGT CGGGCTTTCG
ATCGCCGCCG ACGCGGTGCG GCTGTTGCCG GACGACGCCG CCATCCCCCA CAGCAACGGA
CAATAA
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| Protein sequence | MTAIDGHGSA VRVEACGKTF TDGTRALLPA TLDIARGETL VLLGPSGCGK TTMLRIIAGL
EQPDAGGRVL FDGADMTRVP IEQRNVGMVF QSYALFPNMS VADNIGYGLK IRGVGKAERA
ARIAELVALT NIGGLENRRI EQLSGGQRQR VALARAVAIR PGILLLDEPL TALDAALRDR
LRGELNRLLR SLGITAIYVT HDQAEAMELG DRIVVMRHGA IAQIGTPREI YFAPQSRFVA
EFVGAANIIE GAVDNGLLQL PGGSVAVAAS GMRAAAVAMI RPETIRIVDP AQAALTGIVD
SVAFVGDRQR IVVRGAADKP LAIDAPNTIE VKCGERVGLS IAADAVRLLP DDAAIPHSNG
Q
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