| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1261 |
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| Symbol | |
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| ID | 3973018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1377336 |
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| End bp | 1378871 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924371 |
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| Product | amine oxidase |
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| Protein accession | YP_531142 |
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| Protein GI | 90422772 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.490298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0418037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC CAGGTTCCAG GCCCACCCCA CCCATGCGCA ATGATCATCA ACCCCATGCG
GTGGTGATCG GATCCGGATT CGGCGGCCTC GCCGCCGCGG TCCGATTAGG CGCCAAAGGC
TACCGCGTCA CCGTGCTGGA AAAGCTCGAT GCGCCCGGCG GCCGCGCCTA CGTCTTCAAG
CAGGACGGCT TCACCTTCGA CGCCGGCCCG ACCATCGTCA CGGCGCCCTA TCTGTTCGAA
GAATTGTGGA AGCTGTGCGG CAAGAAGCTG TCCGACGACG TCACGCTGAA GCCGATCTCG
CCGTTCTACC GGATCCGTTT CAACGACGGC ACCTGCTTCG ATTATTCCGA CGACAAGGCG
GACGTGCTGC GGCAGATCGC GCAGCTCTGC CCGGACGACG TTCCGGCCTA TGATCGCTTC
ATGAAGGCCT CCGAGGCGAT CTTCAAGGTC GGCTTCGAAC AGCTTGGCGA CATGCCGTTC
AACAACTTCA CCGACATGGT GAAAATCGCC CCCGACATGA TCAAGCTGGA GAGCTATCGC
AGCGTCTACG GCTTGGTCTC GAAATATTTC CGCGACCCTA AGCTGCGCGT GGTGTTCTCG
TTCCATCCGT TGCTGGTCGG CGGCAATCCG TTCAACGCCA CCTCGGTGTA TTGCCTGATC
ACCTTCCTGG AGAAGCACTG GGGCGTGCAT TTCGCGATGG GCGGCACCGG CAAGCTCGCC
GAAGGCCTGG TCAAGCTGAT CCTCGGCCAG GGCAATATTG TCCGCTATAA TCAGGACGTC
CGCGAGATCA TGGTCGAGAA CGGCGCCGCG ACCGGCGTGC GGCTCGCCTC CGGCGAGGTG
CTCGCCGCCG ACATCGTGGT GTCGAACGCC GATTCGGCCT GGACCTATCG CTATCTGCTG
CCGGCCGCGG TGCGCTCGCG CTGGACCGAT CGCAAGATCG AGAAGGCGCG CTACTCGATG
AGCCTGTTCC TTTGGTACTT CGGCACCAAG AAGCAGTACC CCGACGTCAA GCACCACACC
ATCATGCTGG GGCCGCGCTA CAAGGAGCTG GTCACCGACA TCTTCAAGCG CAAGATCTGC
GCCGACGATT TCAGCCTGTA TCTGCACCGC CCGACCGCGA CCGATCCGTC GCTGGCGCCG
GAGGGCTGCG ATACGTTCTA CGTCTTGTCG CCGGTGCCGC ATATGGACAG CGGCATCAAT
TGGCCGGCCA AGGCGGAAAG CTATCGCAAG CTGATCGCCA AGGAGCTCGG CGCCACCATC
CTGCCGGATC TGGAAAACCA GGTGGTGAGT TCACGGATGC TGACGCCGCA GGATTTCCAG
GACCGGCTGT CCTCGTTCCG CGGCGCCGCC TTCGGCCTCG AGCCGATCCT GACCCAGTCG
GCCTGGTTCA GGCCGCACAA CAAGAGCGAA GACATCGATC GATTGTATCT CGTCGGCGCC
GGAACGCATC CCGGCGCCGG GCTACCCGGT GTGCTGTCGT CGGCGCGGGT GCTCGATGCG
CTGATCCCCG ACGCCCACAC CCTGGTGAAA TCATGA
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| Protein sequence | MLDPGSRPTP PMRNDHQPHA VVIGSGFGGL AAAVRLGAKG YRVTVLEKLD APGGRAYVFK
QDGFTFDAGP TIVTAPYLFE ELWKLCGKKL SDDVTLKPIS PFYRIRFNDG TCFDYSDDKA
DVLRQIAQLC PDDVPAYDRF MKASEAIFKV GFEQLGDMPF NNFTDMVKIA PDMIKLESYR
SVYGLVSKYF RDPKLRVVFS FHPLLVGGNP FNATSVYCLI TFLEKHWGVH FAMGGTGKLA
EGLVKLILGQ GNIVRYNQDV REIMVENGAA TGVRLASGEV LAADIVVSNA DSAWTYRYLL
PAAVRSRWTD RKIEKARYSM SLFLWYFGTK KQYPDVKHHT IMLGPRYKEL VTDIFKRKIC
ADDFSLYLHR PTATDPSLAP EGCDTFYVLS PVPHMDSGIN WPAKAESYRK LIAKELGATI
LPDLENQVVS SRMLTPQDFQ DRLSSFRGAA FGLEPILTQS AWFRPHNKSE DIDRLYLVGA
GTHPGAGLPG VLSSARVLDA LIPDAHTLVK S
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