Gene RPC_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1251 
SymbolbchD 
ID3972044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1366685 
End bp1368484 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content72% 
IMG OID637924361 
Productmagnesium chelatase subunit D 
Protein accessionYP_531132 
Protein GI90422762 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID[TIGR02031] magnesium chelatase ATPase subunit D 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0045417 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTCAGG CCGTCGCATG GTCCGATGCG GCCACCGCGG CGCAATTGTT CGCGGTCGAT 
CCGGTCGGCA CCGGCGTCTT GTTGCGTTCG CGCGCCGGGC CAGTGCGCGA CCGCTGGCTG
GCGATGCTGC GCGCCGCCTT GCCGCCCAAC GACGCCCATA AGCACCTGCC GCTGCATATC
GCCGAGGGCC GGCTGCTCGG CGGCCTCGAT TTGTCGGCGA CGCTGGTCTC CGGCCGTCCG
GTCGCCGAAC GCGGGTTGCT GGCCGAGGCC GACGGCGGCG TGTTGATGCT GGCGATGGCC
GAGCGGATGC AATCCTCGAC CACGGTGCAC GTCACCGCGG CGATGGACGC CCATGAGACG
CTGATCGAGC GCGACGGGCT GTCGCTGCGG ATGCCTGCGC GGTTCGGCGT GGTGGCGCTC
GACGAGGGCC TGGAAGACGA ATTCGCCCCG GCCGGGTTGC GCGACCGGCT GGCGTTCCAC
CTCGACCTCG ACCGCTTCTC GTTCCGCGAC ACCGAGGAAT TCGAGATCAA TGGTGCCGAC
ATCGAAGTGG CGCGCTCGCG GTTGCCGCTG ATCCGCGCCA CCGACGAGCA GATCGAGGCG
ATCGTCACCG CGGCTGCGGC GATGGGCATC GTCTCGCTGC GCGCGCCCTT GTTGACCATC
CGCGTCGCCC GCGCCGCCGC GGCCTGGAGC GGCCACACCG AGATCGACCA GGAAGACATT
TCGATTGCGG CGCGCCTGGT GCTGGCGCCA CGTGCGCTGT ACTTCCCGCA GGCCGAACAG
CCGGACCAGC CGGAGCCGCC GCCGGAAGAA CCGCCGCCGC CGGAGGACAA TTCCGAGGAC
AACAAGGACC AGGACGAGCA GCAGATTCCG GACATCGACC GCGCACTCGA CGAGGTGATC
CTGGCTGCTG CGAAGGCGGC GATCCCGCCC GACGTGCTGG CCTCGCTGCG CGCCTCCGCG
GGCCGCACCC GCGCGCGCTC CTCCGGCAAG GCCGGCGAGC TGCAGAAATC CAACAAGCGC
GGCCGGCCGA CCGGCACGGT GCGCGGCGAA CTGCGCGCCG GCGCCAAGCT CAGCGTGATC
GAGACGCTGC GCTCGGCAGC GCCCTGGCAG CCGCTGCGCC GCCGCGAAGC CGCTGCCACC
GCCGCAGAGG CGATCGCCGC CGGCGGCAAG GCGGCGCCGC AGCCGCGCAT CCTGATCCGC
AAGGACGATT TCCGCATCGC GCGGTTCAAG CAGCGCACCG AGACCATCAC CATCTTCGTG
GTCGACGCCT CGGGCTCGGC GGCGCTGCAT CGGCTCGCCG AAGCCAAGGG CGCGGTGGAG
CTGTTGCTGG CGGATTGCTA TGTGCGCCGC GACCAGGTGG CGATGATCGC GTTCCGCGGC
ACCATCGCCG AAATCCTGCT GCCGCCGACG CGCTCGCTGG CGCGCGCCAA GCGCAGCCTC
GCGGGGCTTC CCGGCGGCGG CGGCACGCCG CTGGCCTGCG GGCTGGATGC CGCCTACGCG
CTGGCGGATT CCATCAAGCG CAAGGGCCAG ACGCCCACCG TGATCCTGAT GACCGACGGC
CGCGCCAACA TCGCCCGCGA TGGCGCGCCC GGCCGGCCGA AGGCCGAGGA AGACGCCATC
GCCTCGGCGC GGCAATTGCG CGCCGCCAAT ATCAACGCGG TGCTGGTCGA TATGTCGCCG
CGGCCGGGGC CGCAGGGCGA GAAGATCGCC AAGGAGATGG GCGCGCGCTA TCTGCCGCTG
CCCTATGCCG ACGCCACCGT GCTGTCGCAG GCGGTGCTGG CGAGCACCCA GGCGGCGTAG
 
Protein sequence
MSQAVAWSDA ATAAQLFAVD PVGTGVLLRS RAGPVRDRWL AMLRAALPPN DAHKHLPLHI 
AEGRLLGGLD LSATLVSGRP VAERGLLAEA DGGVLMLAMA ERMQSSTTVH VTAAMDAHET
LIERDGLSLR MPARFGVVAL DEGLEDEFAP AGLRDRLAFH LDLDRFSFRD TEEFEINGAD
IEVARSRLPL IRATDEQIEA IVTAAAAMGI VSLRAPLLTI RVARAAAAWS GHTEIDQEDI
SIAARLVLAP RALYFPQAEQ PDQPEPPPEE PPPPEDNSED NKDQDEQQIP DIDRALDEVI
LAAAKAAIPP DVLASLRASA GRTRARSSGK AGELQKSNKR GRPTGTVRGE LRAGAKLSVI
ETLRSAAPWQ PLRRREAAAT AAEAIAAGGK AAPQPRILIR KDDFRIARFK QRTETITIFV
VDASGSAALH RLAEAKGAVE LLLADCYVRR DQVAMIAFRG TIAEILLPPT RSLARAKRSL
AGLPGGGGTP LACGLDAAYA LADSIKRKGQ TPTVILMTDG RANIARDGAP GRPKAEEDAI
ASARQLRAAN INAVLVDMSP RPGPQGEKIA KEMGARYLPL PYADATVLSQ AVLASTQAA