| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1251 |
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| Symbol | bchD |
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| ID | 3972044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1366685 |
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| End bp | 1368484 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637924361 |
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| Product | magnesium chelatase subunit D |
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| Protein accession | YP_531132 |
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| Protein GI | 90422762 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0045417 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAGG CCGTCGCATG GTCCGATGCG GCCACCGCGG CGCAATTGTT CGCGGTCGAT
CCGGTCGGCA CCGGCGTCTT GTTGCGTTCG CGCGCCGGGC CAGTGCGCGA CCGCTGGCTG
GCGATGCTGC GCGCCGCCTT GCCGCCCAAC GACGCCCATA AGCACCTGCC GCTGCATATC
GCCGAGGGCC GGCTGCTCGG CGGCCTCGAT TTGTCGGCGA CGCTGGTCTC CGGCCGTCCG
GTCGCCGAAC GCGGGTTGCT GGCCGAGGCC GACGGCGGCG TGTTGATGCT GGCGATGGCC
GAGCGGATGC AATCCTCGAC CACGGTGCAC GTCACCGCGG CGATGGACGC CCATGAGACG
CTGATCGAGC GCGACGGGCT GTCGCTGCGG ATGCCTGCGC GGTTCGGCGT GGTGGCGCTC
GACGAGGGCC TGGAAGACGA ATTCGCCCCG GCCGGGTTGC GCGACCGGCT GGCGTTCCAC
CTCGACCTCG ACCGCTTCTC GTTCCGCGAC ACCGAGGAAT TCGAGATCAA TGGTGCCGAC
ATCGAAGTGG CGCGCTCGCG GTTGCCGCTG ATCCGCGCCA CCGACGAGCA GATCGAGGCG
ATCGTCACCG CGGCTGCGGC GATGGGCATC GTCTCGCTGC GCGCGCCCTT GTTGACCATC
CGCGTCGCCC GCGCCGCCGC GGCCTGGAGC GGCCACACCG AGATCGACCA GGAAGACATT
TCGATTGCGG CGCGCCTGGT GCTGGCGCCA CGTGCGCTGT ACTTCCCGCA GGCCGAACAG
CCGGACCAGC CGGAGCCGCC GCCGGAAGAA CCGCCGCCGC CGGAGGACAA TTCCGAGGAC
AACAAGGACC AGGACGAGCA GCAGATTCCG GACATCGACC GCGCACTCGA CGAGGTGATC
CTGGCTGCTG CGAAGGCGGC GATCCCGCCC GACGTGCTGG CCTCGCTGCG CGCCTCCGCG
GGCCGCACCC GCGCGCGCTC CTCCGGCAAG GCCGGCGAGC TGCAGAAATC CAACAAGCGC
GGCCGGCCGA CCGGCACGGT GCGCGGCGAA CTGCGCGCCG GCGCCAAGCT CAGCGTGATC
GAGACGCTGC GCTCGGCAGC GCCCTGGCAG CCGCTGCGCC GCCGCGAAGC CGCTGCCACC
GCCGCAGAGG CGATCGCCGC CGGCGGCAAG GCGGCGCCGC AGCCGCGCAT CCTGATCCGC
AAGGACGATT TCCGCATCGC GCGGTTCAAG CAGCGCACCG AGACCATCAC CATCTTCGTG
GTCGACGCCT CGGGCTCGGC GGCGCTGCAT CGGCTCGCCG AAGCCAAGGG CGCGGTGGAG
CTGTTGCTGG CGGATTGCTA TGTGCGCCGC GACCAGGTGG CGATGATCGC GTTCCGCGGC
ACCATCGCCG AAATCCTGCT GCCGCCGACG CGCTCGCTGG CGCGCGCCAA GCGCAGCCTC
GCGGGGCTTC CCGGCGGCGG CGGCACGCCG CTGGCCTGCG GGCTGGATGC CGCCTACGCG
CTGGCGGATT CCATCAAGCG CAAGGGCCAG ACGCCCACCG TGATCCTGAT GACCGACGGC
CGCGCCAACA TCGCCCGCGA TGGCGCGCCC GGCCGGCCGA AGGCCGAGGA AGACGCCATC
GCCTCGGCGC GGCAATTGCG CGCCGCCAAT ATCAACGCGG TGCTGGTCGA TATGTCGCCG
CGGCCGGGGC CGCAGGGCGA GAAGATCGCC AAGGAGATGG GCGCGCGCTA TCTGCCGCTG
CCCTATGCCG ACGCCACCGT GCTGTCGCAG GCGGTGCTGG CGAGCACCCA GGCGGCGTAG
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| Protein sequence | MSQAVAWSDA ATAAQLFAVD PVGTGVLLRS RAGPVRDRWL AMLRAALPPN DAHKHLPLHI
AEGRLLGGLD LSATLVSGRP VAERGLLAEA DGGVLMLAMA ERMQSSTTVH VTAAMDAHET
LIERDGLSLR MPARFGVVAL DEGLEDEFAP AGLRDRLAFH LDLDRFSFRD TEEFEINGAD
IEVARSRLPL IRATDEQIEA IVTAAAAMGI VSLRAPLLTI RVARAAAAWS GHTEIDQEDI
SIAARLVLAP RALYFPQAEQ PDQPEPPPEE PPPPEDNSED NKDQDEQQIP DIDRALDEVI
LAAAKAAIPP DVLASLRASA GRTRARSSGK AGELQKSNKR GRPTGTVRGE LRAGAKLSVI
ETLRSAAPWQ PLRRREAAAT AAEAIAAGGK AAPQPRILIR KDDFRIARFK QRTETITIFV
VDASGSAALH RLAEAKGAVE LLLADCYVRR DQVAMIAFRG TIAEILLPPT RSLARAKRSL
AGLPGGGGTP LACGLDAAYA LADSIKRKGQ TPTVILMTDG RANIARDGAP GRPKAEEDAI
ASARQLRAAN INAVLVDMSP RPGPQGEKIA KEMGARYLPL PYADATVLSQ AVLASTQAA
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