Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1251 |
Symbol | bchD |
ID | 3972044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1366685 |
End bp | 1368484 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637924361 |
Product | magnesium chelatase subunit D |
Protein accession | YP_531132 |
Protein GI | 90422762 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0045417 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCAGG CCGTCGCATG GTCCGATGCG GCCACCGCGG CGCAATTGTT CGCGGTCGAT CCGGTCGGCA CCGGCGTCTT GTTGCGTTCG CGCGCCGGGC CAGTGCGCGA CCGCTGGCTG GCGATGCTGC GCGCCGCCTT GCCGCCCAAC GACGCCCATA AGCACCTGCC GCTGCATATC GCCGAGGGCC GGCTGCTCGG CGGCCTCGAT TTGTCGGCGA CGCTGGTCTC CGGCCGTCCG GTCGCCGAAC GCGGGTTGCT GGCCGAGGCC GACGGCGGCG TGTTGATGCT GGCGATGGCC GAGCGGATGC AATCCTCGAC CACGGTGCAC GTCACCGCGG CGATGGACGC CCATGAGACG CTGATCGAGC GCGACGGGCT GTCGCTGCGG ATGCCTGCGC GGTTCGGCGT GGTGGCGCTC GACGAGGGCC TGGAAGACGA ATTCGCCCCG GCCGGGTTGC GCGACCGGCT GGCGTTCCAC CTCGACCTCG ACCGCTTCTC GTTCCGCGAC ACCGAGGAAT TCGAGATCAA TGGTGCCGAC ATCGAAGTGG CGCGCTCGCG GTTGCCGCTG ATCCGCGCCA CCGACGAGCA GATCGAGGCG ATCGTCACCG CGGCTGCGGC GATGGGCATC GTCTCGCTGC GCGCGCCCTT GTTGACCATC CGCGTCGCCC GCGCCGCCGC GGCCTGGAGC GGCCACACCG AGATCGACCA GGAAGACATT TCGATTGCGG CGCGCCTGGT GCTGGCGCCA CGTGCGCTGT ACTTCCCGCA GGCCGAACAG CCGGACCAGC CGGAGCCGCC GCCGGAAGAA CCGCCGCCGC CGGAGGACAA TTCCGAGGAC AACAAGGACC AGGACGAGCA GCAGATTCCG GACATCGACC GCGCACTCGA CGAGGTGATC CTGGCTGCTG CGAAGGCGGC GATCCCGCCC GACGTGCTGG CCTCGCTGCG CGCCTCCGCG GGCCGCACCC GCGCGCGCTC CTCCGGCAAG GCCGGCGAGC TGCAGAAATC CAACAAGCGC GGCCGGCCGA CCGGCACGGT GCGCGGCGAA CTGCGCGCCG GCGCCAAGCT CAGCGTGATC GAGACGCTGC GCTCGGCAGC GCCCTGGCAG CCGCTGCGCC GCCGCGAAGC CGCTGCCACC GCCGCAGAGG CGATCGCCGC CGGCGGCAAG GCGGCGCCGC AGCCGCGCAT CCTGATCCGC AAGGACGATT TCCGCATCGC GCGGTTCAAG CAGCGCACCG AGACCATCAC CATCTTCGTG GTCGACGCCT CGGGCTCGGC GGCGCTGCAT CGGCTCGCCG AAGCCAAGGG CGCGGTGGAG CTGTTGCTGG CGGATTGCTA TGTGCGCCGC GACCAGGTGG CGATGATCGC GTTCCGCGGC ACCATCGCCG AAATCCTGCT GCCGCCGACG CGCTCGCTGG CGCGCGCCAA GCGCAGCCTC GCGGGGCTTC CCGGCGGCGG CGGCACGCCG CTGGCCTGCG GGCTGGATGC CGCCTACGCG CTGGCGGATT CCATCAAGCG CAAGGGCCAG ACGCCCACCG TGATCCTGAT GACCGACGGC CGCGCCAACA TCGCCCGCGA TGGCGCGCCC GGCCGGCCGA AGGCCGAGGA AGACGCCATC GCCTCGGCGC GGCAATTGCG CGCCGCCAAT ATCAACGCGG TGCTGGTCGA TATGTCGCCG CGGCCGGGGC CGCAGGGCGA GAAGATCGCC AAGGAGATGG GCGCGCGCTA TCTGCCGCTG CCCTATGCCG ACGCCACCGT GCTGTCGCAG GCGGTGCTGG CGAGCACCCA GGCGGCGTAG
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Protein sequence | MSQAVAWSDA ATAAQLFAVD PVGTGVLLRS RAGPVRDRWL AMLRAALPPN DAHKHLPLHI AEGRLLGGLD LSATLVSGRP VAERGLLAEA DGGVLMLAMA ERMQSSTTVH VTAAMDAHET LIERDGLSLR MPARFGVVAL DEGLEDEFAP AGLRDRLAFH LDLDRFSFRD TEEFEINGAD IEVARSRLPL IRATDEQIEA IVTAAAAMGI VSLRAPLLTI RVARAAAAWS GHTEIDQEDI SIAARLVLAP RALYFPQAEQ PDQPEPPPEE PPPPEDNSED NKDQDEQQIP DIDRALDEVI LAAAKAAIPP DVLASLRASA GRTRARSSGK AGELQKSNKR GRPTGTVRGE LRAGAKLSVI ETLRSAAPWQ PLRRREAAAT AAEAIAAGGK AAPQPRILIR KDDFRIARFK QRTETITIFV VDASGSAALH RLAEAKGAVE LLLADCYVRR DQVAMIAFRG TIAEILLPPT RSLARAKRSL AGLPGGGGTP LACGLDAAYA LADSIKRKGQ TPTVILMTDG RANIARDGAP GRPKAEEDAI ASARQLRAAN INAVLVDMSP RPGPQGEKIA KEMGARYLPL PYADATVLSQ AVLASTQAA
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