Gene RPC_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1250 
Symbol 
ID3972043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1365666 
End bp1366688 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID637924360 
Productmagnesium chelatase ATPase subunit I 
Protein accessionYP_531131 
Protein GI90422761 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID[TIGR02030] magnesium chelatase ATPase subunit I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00136205 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACTG TTTTCCCCTT TTCCGCCATC GTCGGCCAGG ACGAGATGAA GCTTGCGCTG 
CTGATCGCGG CGGTCGATCC GAAGGTCGGC GGCGTGTTGG CGTTCGGCGA TCGCGGCGCC
GGCAAGTCCA CCGCGGTGCG CGCGCTGGCG GCCCTGCTGC CGAAGATGAA GGTCGTGGTC
GGCTGCCGCT ACAATTGCGA TCCCGACGTG CCGAAGGCGT TCTGCGACGA GTGCCGCGAC
AAGGACAAGC ACGGCAAGCT GAAGACCGCG CAGGTGCCGG TGCCGGTGGT CGATCTGCCG
CTCGGCGCCA CCGAGGACCG CGTAGTCGGC GCGCTCGATC TGGAACGCGC GCTGGCGCGC
GGCGAGAAGG CGTTCGAGCC CGGCCTGCTG GCCCGCGCCC ATCGCGGCTT CCTCTACATC
GACGAAGCCA ACCTGCTTGA AGATCACCTG GTCGACCTCT TGCTCGACGT CGCCGCCTCC
GGCGAGAACG TCGTCGAGCG CGAGGGCCTC TCGATCCGCC ATCCCGCCCG CTTCGTGCTG
GTCGGCACCG GCAACCCGGA AGAGGGCGAG TTGCGCCCGC AATTGCTCGA TCGTTTCGGC
ATGTCGGTCG AGGTCAAGAC CCCCGACGAC CTGCCGAGCC GGATGGAAGT GGTGCGCCGC
CGCGACGCCT TCGAGAGCGA TCCCACGGCG TTCCTCGCCG CCTGGACCAA GGAAGAGGCC
AAGCTGCGCA AGAAGATCAC CCAGGCGCGC GAACGGCTGC CCGAGGTCAC GGTGTCCGAT
GCTGCCCTTG AACGCGCCGC GACCTTGTGT ATGCGACTTG GCACCGACGG CTTGCGCGGC
GAACTGACCC TGATGCGCGC CGCCCGCGCA CTGGCGGCGA TCGAACACGC CAAGCACGTC
ACCGACGCGC ACCTGAAGAA GATCGCGCCC TCGGCGCTGC GGCATCGGCT GCGGCGCAAC
CCGCTCGACG ACGCCGGCTC CACCGTCCGC GTCGACCGCG CCATCGTCGA AGTGTTCGGA
TGA
 
Protein sequence
MATVFPFSAI VGQDEMKLAL LIAAVDPKVG GVLAFGDRGA GKSTAVRALA ALLPKMKVVV 
GCRYNCDPDV PKAFCDECRD KDKHGKLKTA QVPVPVVDLP LGATEDRVVG ALDLERALAR
GEKAFEPGLL ARAHRGFLYI DEANLLEDHL VDLLLDVAAS GENVVEREGL SIRHPARFVL
VGTGNPEEGE LRPQLLDRFG MSVEVKTPDD LPSRMEVVRR RDAFESDPTA FLAAWTKEEA
KLRKKITQAR ERLPEVTVSD AALERAATLC MRLGTDGLRG ELTLMRAARA LAAIEHAKHV
TDAHLKKIAP SALRHRLRRN PLDDAGSTVR VDRAIVEVFG