Gene RPC_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1246 
Symbol 
ID3972039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1360589 
End bp1361095 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID637924356 
Producthypothetical protein 
Protein accessionYP_531127 
Protein GI90422757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000296888 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACC TCGAATTATG GCCCGCAGAC GGCACGAGGA ACTGGCAGCT GATCACCGAC 
GCGGTGATGG GCGGGATTTC GCGCGGCGCC ATCGCCGAGG AGATCGTCGA CGGTCGCGCC
GCGGTGCGGA TGCGCGGCGC GGTGTCGACC GACAACAACG GCGGCTTCAT CCAGATCGCG
CTCGACCTCG CCGCGGCGGG CGCCATGATC GACGCCTCTG GCTTCGAAGG GATCGCGCTC
GACGTCGCCG GCAATGGCGA GAGCTACGGC GTGCATCTGC GCACCCCGGA CGTCAGCCGG
CCGCAGCAAT CCTGGCGGCA GGGCTTTGTT GCGACGCGGG AGTGGCAAAC CATCCTGTTG
CCATTCGCGC AATTTGTTCC GCATCGCATC GACATTGCGC TCGATCCCAG CCGGCTGCGG
CGGATCGGCC TGGTGGCGAT CGGCCGCGAA TTTGACGCAG ATCTATCGGT GGCGCGGCTG
GCGCTGTATG GATCGACAAC AGCCTGA
 
Protein sequence
MTDLELWPAD GTRNWQLITD AVMGGISRGA IAEEIVDGRA AVRMRGAVST DNNGGFIQIA 
LDLAAAGAMI DASGFEGIAL DVAGNGESYG VHLRTPDVSR PQQSWRQGFV ATREWQTILL
PFAQFVPHRI DIALDPSRLR RIGLVAIGRE FDADLSVARL ALYGSTTA