Gene RPC_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1228 
Symbol 
ID3969105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1345583 
End bp1345957 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID637924339 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_531110 
Protein GI90422740 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000969205 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGGAT TGTCGAAGAA AAAGCCCATC GTTTTGGTGG TTGAGGACGA ACTCCTGCTC 
CGGGCTGCTG CCGTCGACTT CATCGAAGCG GCGGGCTTCT CGGTTCTGGA GGCCGCAAGC
GCCGACGAGG CGATCGAGAT CCTGGAAGCC CGCGACGACA TTCGCGTGGT GTTCACCGAT
ATTCAGATGC CCGGCTCGAT GGATGGGCTG AAACTCGCCC AGGCGGTACG GGGACGGTGG
CCGCCGATCG AAATCATTGC AACGTCGGGT CACGTGTCGG TCGGTCCTGA TGATCTTCCC
GCGCGCGGTC GGTTTGTCCG CAAGCCTTAC AGCCCAGCGC AGATCGCCAG CATGATCAGC
GAATTGATCA CCTGA
 
Protein sequence
MAGLSKKKPI VLVVEDELLL RAAAVDFIEA AGFSVLEAAS ADEAIEILEA RDDIRVVFTD 
IQMPGSMDGL KLAQAVRGRW PPIEIIATSG HVSVGPDDLP ARGRFVRKPY SPAQIASMIS
ELIT