| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1219 |
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| Symbol | |
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| ID | 3969096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1334300 |
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| End bp | 1335895 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637924330 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_531101 |
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| Protein GI | 90422731 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0111682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC GAAAATCTCT CGTCGTCGCT GCCATCGTGG CGATCGGCGC AATTAGTTCT
GCGCGCGCCG AGTCGGTGGT GCGATACGGC ATATCGATGG CCGATATTCC GCTGACCACC
GGCCAGCCGG ATCGTGGCGC CGGCGCTTAC CAGTTCACCG GGTACACCAT CTACGATCCG
TTGGTGGCCT GGGAGATGAA TGTGGCGGAC CGCCCGGGAA AGCTGGTGCC GGGGCTCGCG
ACATCATGGA AAGTCGATGA TGGCGATAAG AAAAAGTGGC GCTTCACTTT GCGCAAGGGC
GTCAAATTTC ACGACGGAAG TGAATTCAAT GCCGATGCGG TGGTCTGGAA TTTAGACAAG
GTGCTGAACG ACAAGGCACC GCAGTTCGAC AAGCGGCAAA GCGCGCAGGT CAAGACCCGG
CTGCCGTCGG TCGCCAGCTA CACCAAAATC GATGACGACA CCGTGGAAAT TACAACCAAG
ACGATCGACT CCTTCTTCCC GTACCAGATG CTCTGGTTCT TGGTGTCGAG CCCGACGCAA
TACGCCAAGC TCGGCAATGA CTGGGACAAG TTCGCCGCGC AGCCGTCCGG CACCGGGCCG
TTCAAGCTGA CCAAGCTGGT GCCGCGCGAA CTCGCCGAAC TCACCCGCAA TGATGAGTAC
TGGGACAAGG CGCGGCTGCC GAAGACCGAC AAGCTGGTGC TGGTGCCGAT GCCGGAAGCC
TTAACCCGCA CCAACGCGCT GCTCGCCGGC CAGGTCGATC TGATCGAGAC CCCGGCGCCG
GATGCCGTGC CGCAGTTGAA GTCGGCCGGC ATGAAGATCG TCGACAACGT CACCCCGCAC
GTCTGGAATT ATCACCTCAG CGTGTTGCCG GGTTCGCCCT GGACCGACGT GCGGTTGCGC
AAGGCGCTCA ATCTGGCGAT CGACCGCGAT GCCGTCGTCG GCCTAATGAA TGGCCTCGCC
AAACCGGCGA TCGGCCAGGT CGATCCGTCG AGCCCGTGGT TCGGCAAGCC GACCTTCAAC
ATCAAATACG ATCTCGCCGA AGCCAAGCGG CTGGTGAAGG AAGCCGGCTA TTCGCCGGAG
AAGCCGTTGA AGGCGACCTT CATCATCGCC AATGGCGGCA CCGGCCAGAT GCTGTCGCTG
CCGATGAACG AGTTTCTGCA GCAGAGCTTC AAGGAGATCG GCGTCGACGT CGAGTTCAAG
GTGGTCGAAC TCGAAGTGCT GTACACCGCC TGGCGCAAGG GCGCGGCCGA CGACAGCATG
AAGGGCATCA CCGCCAACAA CATCGCCTAT GTCACCTCCG ATCCGCTCTA CGCCATCGTG
CGGTTCTTCC ACTCCGGGCA GATCGCGCCG GTCGGCGTCA ATTGGGGCGG TTACAAAAAT
CCGAAGGTTG ACGCCTTGAT CGACGAAGCC AAGACCACCT TCGACCCGAC CAAGCAGGAC
GAATTGCTGG CGCAGGCGCA TGGCTTGATC GTCGACGACG CGGTGCTGGT CTGGGTGGTG
CACGACACCA ACCCGCACGC TCTGTCGCCT AAGGTGAAGA GCTTCGTGCA GGCGCAGCAC
TGGTTCCAAG ACCTCACTAC GATCGGTCTG CAGTAA
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| Protein sequence | MTVRKSLVVA AIVAIGAISS ARAESVVRYG ISMADIPLTT GQPDRGAGAY QFTGYTIYDP
LVAWEMNVAD RPGKLVPGLA TSWKVDDGDK KKWRFTLRKG VKFHDGSEFN ADAVVWNLDK
VLNDKAPQFD KRQSAQVKTR LPSVASYTKI DDDTVEITTK TIDSFFPYQM LWFLVSSPTQ
YAKLGNDWDK FAAQPSGTGP FKLTKLVPRE LAELTRNDEY WDKARLPKTD KLVLVPMPEA
LTRTNALLAG QVDLIETPAP DAVPQLKSAG MKIVDNVTPH VWNYHLSVLP GSPWTDVRLR
KALNLAIDRD AVVGLMNGLA KPAIGQVDPS SPWFGKPTFN IKYDLAEAKR LVKEAGYSPE
KPLKATFIIA NGGTGQMLSL PMNEFLQQSF KEIGVDVEFK VVELEVLYTA WRKGAADDSM
KGITANNIAY VTSDPLYAIV RFFHSGQIAP VGVNWGGYKN PKVDALIDEA KTTFDPTKQD
ELLAQAHGLI VDDAVLVWVV HDTNPHALSP KVKSFVQAQH WFQDLTTIGL Q
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