| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1217 |
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| Symbol | |
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| ID | 3969094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1331334 |
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| End bp | 1332287 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924328 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_531099 |
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| Protein GI | 90422729 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0790804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCATCT ATATCGCCCG CCGCATCGTC TATGTGATCC CGATCGTGAT CAGCGTCGCG
CTGGTGTGTT TCCTGCTGGT GCACATCACC CCCGGCGATC CGCTGGTCGC GGTGCTTCCG
GCCGACGCCT CGCAGGAACT CGCTGCGCAA CTGCGCATCG CCTACGGCTT TGACCGGCCG
CTGCCGGTGC AGTTCGGGCT GTGGCTGTGG AAGGCGCTGC ACGGCGATCT CGGCAATTCG
ATCGCCACCG GCCGCCCGGT GCTCGCCGAA GTGCTGCGCG CGGTCGGCAA CACCGTGACG
CTGGCGATTG CCGCGGCGAC CATCGGCTTT TCGCTCGGGC TGTTCTTCGG GCTGATCGCC
GGTTACTTCC GCGACACCTG GGTCGACAAG CTGGCGACCT CGATCGCGAT CGCCGGCGTC
TCGGTGCCGC ATTATTGGCT CGGCATGGTG CTGGTGATCA TCTTCTCGGT GCAGCTGAAC
TGGCTGCCCG CGGTCGGCGC CGGCCCCGGC GGCTCCGGAC AATGGGGCTG GGACTGGGAG
CACCTGAAAT ATCTGGTGCT GCCGGCGATC ACCACCTCCG TCATTCCGAT GGGCATCGTC
ACCCGCACGG TGCGGGCGCT GACCGGGGAT ATCCTGTCGC AGGATTTCGT CGAGGCGTTG
CGCGCCAAGG GGCTGCGCGA GACCGGCGTA TTCCGTCACG TCATCAAGAA CGCGGCGCCG
ACCGCGCTCG CCGTGATGGG GCTGCAACTC GGCTACATGC TCGGCGGCTC GATCCTGATC
GAGACGGTGT TCTCCTGGCC GGGCTCGGGG CTTTTGTTGA ACTCCGCGAT CTTCCAGCGC
GACCTGCCGC TGTTGCAGGG CACCATCCTG GTGCTGGCGC TGTTCTTCGT ATTCCTCAAT
CTCGTCGTCG ACATCGCGCA GGCCGCGATC GATCCGCGCA TCAAGCGAAG CTGA
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| Protein sequence | MFIYIARRIV YVIPIVISVA LVCFLLVHIT PGDPLVAVLP ADASQELAAQ LRIAYGFDRP
LPVQFGLWLW KALHGDLGNS IATGRPVLAE VLRAVGNTVT LAIAAATIGF SLGLFFGLIA
GYFRDTWVDK LATSIAIAGV SVPHYWLGMV LVIIFSVQLN WLPAVGAGPG GSGQWGWDWE
HLKYLVLPAI TTSVIPMGIV TRTVRALTGD ILSQDFVEAL RAKGLRETGV FRHVIKNAAP
TALAVMGLQL GYMLGGSILI ETVFSWPGSG LLLNSAIFQR DLPLLQGTIL VLALFFVFLN
LVVDIAQAAI DPRIKRS
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