Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1213 |
Symbol | |
ID | 3969090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1327744 |
End bp | 1329159 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637924324 |
Product | amidase |
Protein accession | YP_531095 |
Protein GI | 90422725 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.590428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGGA CTGATCCGAC ACTGTTGTCG CTAACCGAAA TCGCGCAGGC GATCGCGCAG AGGAAATTCT CATCGCGCGA GGCGACGCAG GCCTGCCTGA ACCGCATCGC GGCGTTGCAG CCCAAGCTCA ACGCCTTTGT CGCGATCGAG CCCGACGAAG CGCTGGCCGC GGCCGACGCC GCCGATGCGG CGCTGGCGCG TGGCGAGAGC AAAGGCGCGC TGCATGGCGT GCCGCTGGCG CACAAGGACA TGTATTACGA CCAGGGCTAC GTCGTCACCT GCGGCTCCAA GATCCGCCGC GACTTCGTGG CGACCACCAC CTCGACCGCG CTGCAACGGC TGAAGGACGC CGGCACGGTG CGGCTCGGCT CGCTGCAGAT GGCGGAATTC GCCTATGGGC CGACCGGCCA CAACGCGCAT TTCGGCGCGG TGCATAATCC GTGGGCCATT GAGCGCATCA CCGGCGGTTC GTCCTCGGGC TCAGGCTCGG CGGTCGCGGC ACGGCTGACC TATGCGGCGC TCGGCTCCGA CACCGGCGGC TCAATCCGGA TGCCGGCGCA TTTCTGCGGC GTCACCGGCT TGAAGACCAC GGTCGGCCTG ATCAGCCGCG CCGGCGCGAT GCCGCTGTCG CAATCGCTCG ACACCGTCGG GCCCTTGGCG CGCACGGCCG AAGACTGCGC GCTGCTGCTC GGCCTGATGG CCGGCGCCGA TCCCGCCGAT CCGACCTGCA GTTCGCGCGA CGTCCCAGAC TATAGCGCGG CGACGAAGGG CAAACTGAGC GGCGTCCGCA TCGGGCTTCC CAGCGCATTC TATGTCGACG ACCTCGATCC CGAAGTCGCA CGCGTGCTCG ACGACACCGT TGCAACGCTG CAACGCGAAG GCGCCGACAT CGTCAAGGTC GAGCTGCCGG ATCAGCGCCA GCTCTCGGCA GCGTGCCAAT TGGTGCTCGC GGTCGAGGCC GCCGGCTTTC ACACAAGCTG GATGATCGAG CGGCCGCAGG ACTACGGCCC GCAAGTGTTG ATGCGGCTGC AGAACGCGCT GGCGATTCCG GCCGTGACCT ATCTTGAAGC GATGCGCTGG CGCGGCGTGG CGCTGGCCGC GCATCTCGCA GCGACCGCCG GCGTCGACGC GGTGCTGGCG CCGGTGGCGC CGGTGGCAGC ACCGACCATC GTCGAGAGCG ACGTCGGCAA TTCGCTCGAC GCCGAGGCGG TGATCCAGCG GCTGACGCGC TTTACCCGGC CGATCAACTA TCTCGGCCTG CCGGCGCTGG CGCTGCCCTG CGGCTTCACC AAAGCCCTGC TGCCGGTCGG GCTGCAGCTG ATCGGCAAGC CGTTCGACGA GGCGATGCTG CTGCGGATCG GCGCGGCCTG GCAGCGCGTC ACTGACTTTC ACAGCAAGAC GCCGGAGCTT GCATGA
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Protein sequence | MNGTDPTLLS LTEIAQAIAQ RKFSSREATQ ACLNRIAALQ PKLNAFVAIE PDEALAAADA ADAALARGES KGALHGVPLA HKDMYYDQGY VVTCGSKIRR DFVATTTSTA LQRLKDAGTV RLGSLQMAEF AYGPTGHNAH FGAVHNPWAI ERITGGSSSG SGSAVAARLT YAALGSDTGG SIRMPAHFCG VTGLKTTVGL ISRAGAMPLS QSLDTVGPLA RTAEDCALLL GLMAGADPAD PTCSSRDVPD YSAATKGKLS GVRIGLPSAF YVDDLDPEVA RVLDDTVATL QREGADIVKV ELPDQRQLSA ACQLVLAVEA AGFHTSWMIE RPQDYGPQVL MRLQNALAIP AVTYLEAMRW RGVALAAHLA ATAGVDAVLA PVAPVAAPTI VESDVGNSLD AEAVIQRLTR FTRPINYLGL PALALPCGFT KALLPVGLQL IGKPFDEAML LRIGAAWQRV TDFHSKTPEL A
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