| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1212 |
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| Symbol | |
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| ID | 3969089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1326722 |
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| End bp | 1327747 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924323 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_531094 |
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| Protein GI | 90422724 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.833176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACC TGGTCGAGGT GAAAAATCTC AACATCCGCT TCACCGGCGA GCGCACCGTG
CATGCGGTGA ACGACCTCAG CCTGTCACTC GGCGAAGGCG AAGTGCTCGG GCTGCTCGGC
GAATCCGGCT CCGGCAAGAG CGTGACGCTA CGCGCCTTGA TGCGGCTATT GCCGAACAAG
CGCACGCAGA TTTCCGGCAC CGTCAACGTG CTCGGCCAAG ACGTGCTGGC GCTCGATGAC
GACGGGCTGT CGGCGTTTCG CGGCCAGACC GTATCGATGA TCTTCCAGGA GCCGGCGCTG
GCGCTGGACC CGGTCTACAC CATCGGCCGG CAGATCGCCG AAAGCGTGAT GCGCCACGAA
GGCAAGAGCC AGACCGAAGC GATGGCGCGC GCGCTGCAGA TGCTGGAAGT GGTGCGGATC
CCGTCGGCCA AGCGACGGCT CGACGCCTAT CCGCATGAAA TGAGCGGCGG GATGCGGCAG
CGCGCGATGA TCGCGCTGGC CTTGGCCTGC AAGCCGAAGA TTCTTCTGGC CGACGAGCCG
ACCACCGCGC TCGACGCCAC CGTGCAGATC CAGATCCTTT TGTTGCTGCG CGAATTGCAG
CGCGAATTCG GCATGTCGGT GATCTTCGTC ACCCACGACA TCGGCGTGGC GATCGAGATC
TGCGACCGCG TCGCGGTGAT GTATGCCGGG CAGATCGTCG AACAGGGCAC GCTCAGCCAG
ATCGTGCGCA CGCCGCTGCA TCCCTATGCG CAGGGGCTGT TGGCCTCCAC CGTGCACGGC
GCCAAGCGCG GCGCAAGGCT GGAGACCATC CCCGGCACGC CGCCGTCGCT CGACAAGGCG
CCGAGCGCCT GCTCGTTCGC GCCGCGCTGC CGCTACGCGC AGCCGCGCTG CGTCGAGGCG
TTGCCGCCGG ACGTCCAGGT CGGCCCGAAC CGCACTGCGC GTTGCATCCT GGCCGAGCCG
ATCGCCGACG GTGTCGCGCC GGCGCGCGCC GCCGATGCTG TTGCGGGCGG GCTCGATCTC
GCCTAA
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| Protein sequence | MSNLVEVKNL NIRFTGERTV HAVNDLSLSL GEGEVLGLLG ESGSGKSVTL RALMRLLPNK
RTQISGTVNV LGQDVLALDD DGLSAFRGQT VSMIFQEPAL ALDPVYTIGR QIAESVMRHE
GKSQTEAMAR ALQMLEVVRI PSAKRRLDAY PHEMSGGMRQ RAMIALALAC KPKILLADEP
TTALDATVQI QILLLLRELQ REFGMSVIFV THDIGVAIEI CDRVAVMYAG QIVEQGTLSQ
IVRTPLHPYA QGLLASTVHG AKRGARLETI PGTPPSLDKA PSACSFAPRC RYAQPRCVEA
LPPDVQVGPN RTARCILAEP IADGVAPARA ADAVAGGLDL A
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