| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1193 |
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| Symbol | |
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| ID | 3969148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1306055 |
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| End bp | 1307221 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924304 |
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| Product | peptidase M20D, amidohydrolase |
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| Protein accession | YP_531075 |
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| Protein GI | 90422705 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.95754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCC TCGACCGTAT TGACGCTTTC GCCGACGACC TCACCGCGAT CCGCCGCGAT
CTGCATGCCC ATCCGGAGGT CGGCTTCGAG GAGGTCCGCA CCTCCGGCAT CGTCGCCGAA
AAACTCGCGC AATACGGCAT CGAGGTGCAT CGCGGGCTCG GCGGCACCGG GGTGGTCGGC
GTGCTGAAAG GCAAGGGCGC CGGCGGCAAG CGGATTGGGC TTCGCGCCGA CATGGACGCG
CTGCCGATGG AGGAGAACAC CAACCTCGCC TGGCGCTCGA CGATTCCCGG CCGCTTCCAC
GGCTGCGGCC ATGACGGCCA CACCACGATG TTGCTCGGCA CCGCGCGCTA CCTCGCCGAG
ACCCGCGACT TCGACGGCAC CGTGCATTTC ATCTTCCAGC CCGCCGAGGA AGGCCTCGGC
GGCGCCCGCG CCATGATCAA GGACGGGCTG TTCCAAAAAT TTCCCTGCGA TGAAATCTAT
GGCCTGCACA ACGCGCCCAA TCTCGCGCTC GGCGAGATCG CGGTGTTTCC CGGCCCGGCG
ATGGCCGGCG CGGATTTCTT CGACATCACC ATCACCGGCT ACGGCGCCCA CGGCGCGATG
CCGGAGCGCT CCAAGGATCC GGTGATCGTC GCGATGACGC TCGGTCAGGC GATGCAGAGC
ATCGTCAGCC GCAACATCGA TCCGTTCAAA TCCGCGGTGC TGTCGATCAC CCAGATCCAT
TCCGGCTCGG CCTACAACGT GATCCCGGGC GAAGCCAAAC TCTGCGGCAC GGTGCGCGCC
TTCGCCGACG AGATCCGCGT CTTGATCCGC GAGCGGATGC GCGCGCTCGC CGCCGGCATT
GCGCTCGCGT TCGATGTCGA GATCAAGGTC GAGATCCGCG ACGGCTTCAG CGTGCTGGTC
AATCAGGAGG AGCAGACCGC GGTGGTGGCC GGCGTCGCCC GCGACATCGT CGGCGACGCC
AAGGTGCTGA CCACGTCGCG GCCGAAGATG GGCAGCGAGG ACTTTGCCGA TATGCTGCAC
GCGGTGCCGG GCGCTTACTT CTGGCTCGGC CACGACGGCT CGGTGCCGCT GCACAATCCC
GGCTACGTGT TCGACGACCA GCTGCTGCCG ATCGGCGCCA GCATGCTGGC GCGGATCATC
GAAACCCGGT TGCCTGTCGC GGGGTGA
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| Protein sequence | MPTLDRIDAF ADDLTAIRRD LHAHPEVGFE EVRTSGIVAE KLAQYGIEVH RGLGGTGVVG
VLKGKGAGGK RIGLRADMDA LPMEENTNLA WRSTIPGRFH GCGHDGHTTM LLGTARYLAE
TRDFDGTVHF IFQPAEEGLG GARAMIKDGL FQKFPCDEIY GLHNAPNLAL GEIAVFPGPA
MAGADFFDIT ITGYGAHGAM PERSKDPVIV AMTLGQAMQS IVSRNIDPFK SAVLSITQIH
SGSAYNVIPG EAKLCGTVRA FADEIRVLIR ERMRALAAGI ALAFDVEIKV EIRDGFSVLV
NQEEQTAVVA GVARDIVGDA KVLTTSRPKM GSEDFADMLH AVPGAYFWLG HDGSVPLHNP
GYVFDDQLLP IGASMLARII ETRLPVAG
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