Gene RPC_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1180 
Symbol 
ID3969500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1284050 
End bp1285294 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content63% 
IMG OID637924291 
Productacetate kinase 
Protein accessionYP_531062 
Protein GI90422692 
COG category[C] Energy production and conversion 
COG ID[COG0282] Acetate kinase 
TIGRFAM ID[TIGR00016] acetate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTGA CCATCAACTG CGGCAGTTCC AGCCTCAAAT ATCAGCTCTA TACGTCGGAT 
CTGAGCGGTG TGGTGGGCAA GGGGATCGTC AGTCGGATCG GCGAGGCGTG TCCCTATATC
GAGCATCGCG CCGGCGGACG TAAGATCCGG CAAGACGTCG AGGCCGCCGA CCACCGCATG
GCGCTGCGGG TGGCGATGGA AAGCCTGCTG CACCCGGAAT GGGGCGCGAT CAAAGACGTC
AGCGCAATCG AAGCGGTCGG CCATCGCGCC GTACATGGCG GCGATATCTT CGTTGAGTCG
GTTCTGGTCA CCGACGACGT GATTCGGCAG CTCGAGCAAT GCACGCCGTT GGCACCGCTG
CACAACCCGC TCAATCTGCA CGGCATCCAC GAGGCCAGGC GGCTGCTGCC GGGAATTCCG
CAAGTGGTCG TGTTCGACAC CTCGTTTCAT CAGGGAATGC CGGCCCAGGC CTATGTCTAC
GCGCTGCCGT ATCGCTACTA CGCCGAACAC AAAATTCGGC GCTACGGCTT TCACGGCACC
TCGTGCCGCT TCGTGAGCGG CCGCGCCGCC GAGGTCTTGG AACGCCCGCT GCAAGAGCTT
CGCATGGTGA TCTGCCATCT TGGCAATGGC GTCACCATCG ACGCCGTGGC CGGCGGTCGC
TCGGTGGATA CCAGCATGGG GTTCGGAACA TTCTCCGGGA CCATGATGGG CACGCGTTCG
GGTGACTTCG ATCCGGGCCT GATCTTCTAC TTGAACCGAA CGCTCAATAT GAGCTTGGGC
GACATCGAGG CGACTTGCTA CAAGGAGAGC GGCCTGCTCG GGGTGTCGGG TGTCAGCAAC
GACATGCGGG AGGTGGTGGA ACACGCGATC GCCGGCAATC ACCGCTGCAG CCTCGCCATC
GACATGTTCG TCTACATGAT CAAGAAATAC ATCGGCGGCT ATGCCGCGGC GATGGGTGGG
CTGGACGCCT TGGTGTTCAC CGCCGGGATC GGCGAGAACA GTCCCTACAT CCGAGCCCGG
ATCTGCGGCG GTTTGGGCTT CCTCGGCATT GAGGTCGACG ACCTGGCCAA TGACGCGGTG
GACGGAGCTT GCGCCATCAT CAGTCCGAGA ACGGCGTCGG CGGCAACCAT GGTCGTTCCC
ACCGACGAGG AAAAGATGAT CGCACTCGAC ACCGTGCATC TGACGGCCGG TTGCGGCGAT
CACAGCCGAC GTTCGGCGCA GCGGGTCGAA GCCGCGGCCG GGTAG
 
Protein sequence
MILTINCGSS SLKYQLYTSD LSGVVGKGIV SRIGEACPYI EHRAGGRKIR QDVEAADHRM 
ALRVAMESLL HPEWGAIKDV SAIEAVGHRA VHGGDIFVES VLVTDDVIRQ LEQCTPLAPL
HNPLNLHGIH EARRLLPGIP QVVVFDTSFH QGMPAQAYVY ALPYRYYAEH KIRRYGFHGT
SCRFVSGRAA EVLERPLQEL RMVICHLGNG VTIDAVAGGR SVDTSMGFGT FSGTMMGTRS
GDFDPGLIFY LNRTLNMSLG DIEATCYKES GLLGVSGVSN DMREVVEHAI AGNHRCSLAI
DMFVYMIKKY IGGYAAAMGG LDALVFTAGI GENSPYIRAR ICGGLGFLGI EVDDLANDAV
DGACAIISPR TASAATMVVP TDEEKMIALD TVHLTAGCGD HSRRSAQRVE AAAG