Gene RPC_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1173 
Symbol 
ID3969493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1276710 
End bp1277213 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID637924284 
Producthypothetical protein 
Protein accessionYP_531055 
Protein GI90422685 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGCAC CCACAGCCGA GATGCGAAGT ATCACCGAGG CAATCCACGC GGTGCTGGCC 
AATCTCAATG GTCCCGCCTT CGCGTTGGAC GATGCCTGTC GGCTGGCGCG CGCGGCCGAG
CACAAGGCCG CCGAGATCGG CGTGCCGATG GTGATCTCGA TCGCCGATGC CACAGGCGGC
ATGTTGCTGC TGCATCGGAT GGATGGCGCG CTGCCGGCGA GCTTCGATAT CGCGATCAAC
AAGGCCTACA CCGCCGCCAT CTTCAGGATG GCAACTCATG ATCTCGGGGC CTTGGCGCAG
CCCGGCCGCT CGCTCTACGG CGTGCAAACC ACCAATCAGG GTCGGGTGGT GATTTTCGGC
GGCGGATATC CGGTGTTGCG CCGAACAACC GTGATCGGTG CCATCGGGGT CAGTGGTGGC
ACCGTCGAAC AAGACATGCA GATCGCAACC TTTGCGCTGC AAACATTCGA GGCAGAAGCA
AAGCTCTGCG CTGAAGGAGA ATAG
 
Protein sequence
MSAPTAEMRS ITEAIHAVLA NLNGPAFALD DACRLARAAE HKAAEIGVPM VISIADATGG 
MLLLHRMDGA LPASFDIAIN KAYTAAIFRM ATHDLGALAQ PGRSLYGVQT TNQGRVVIFG
GGYPVLRRTT VIGAIGVSGG TVEQDMQIAT FALQTFEAEA KLCAEGE