Gene RPC_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1165 
Symbol 
ID3969485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1271944 
End bp1272237 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content65% 
IMG OID637924276 
Productmicrocompartments protein 
Protein accessionYP_531047 
Protein GI90422677 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.128739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGG AAGCTCTAGG CATGGTGGAA ACCAAAGGTT TGGTTGCCGC GATCGAAGCC 
GCCGACGCCA TGGTGAAGTC GGCCAACGTG GCCTTGATCG GCTACGAAAA GATCGGATCC
GGACTGGTGA CGGTCATGGT CCGCGGCGAT GTCGGCGCGG TGAAGGCCGC AACCGACGCC
GGCGCCGTGG CCGCCGCGAA GGTCGGCGAG GTGGTGTCGG TGCACGTCGT CCCGCGGCCG
CATTCGGAAG TCGAAAAGAT CCTGCCGCAT GGCGCAACCG CCGCCGCAGC CTAA
 
Protein sequence
MQQEALGMVE TKGLVAAIEA ADAMVKSANV ALIGYEKIGS GLVTVMVRGD VGAVKAATDA 
GAVAAAKVGE VVSVHVVPRP HSEVEKILPH GATAAAA