| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1151 |
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| Symbol | |
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| ID | 3969508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1252542 |
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| End bp | 1253471 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924261 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_531033 |
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| Protein GI | 90422663 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAC TGTTTATCAA CCATCCTGCC TGTCTCGAGC ACGACACGCC CTATGGTCAT
CCGGAGCGCG CCGACCGGCT GCGCGCGGTG AACCAGGGAC TGGCGGAAGC GCGCTTCAGT
GCATTGCAGC GCAGCGAAGC GCCGGAAGCC GATCTCGACA CCATCGCGCT GTGCCACACC
GATCATCACA TCGTCGAACT GCGGCAGATG TCGCCGCAGA CCGGGCTGAT CTTCGTCGAC
AGCGACACCT CGATGTCGCC GGGCACCTGG GAAGCCGCGT TGCGCAGCGT CGGCGGCGCG
GTGGCGGCGA CCGACGCGGT GATGACCGGC CAGGTCCACA ACGCCTTTGT GGCGACGCGG
CCGCCCGGTC ACCACGCCGA GATCGGCAAG CCGATGGGGT TCTGCTTCTT CGGCAATGCA
GCAATCGCCG CGCGCTATGC GCAGCGCAAA TACGGCATCG GCCGCGCCGC GGTGGTGGAT
TTCGACGTCC ACCACGGCAA CGGCACTCAG GAAATCTTCT GGGGCGACAA GACCGTGATG
TATTGCTCGA CGCATCAGAT GCCGCTGTTT CCCGGCACCG GGGCGGTCGG CGAGCGCGGC
GAGCACGACA ATATCGTCAA CGCGCCGCTG CAATCCGAGG ACGGCACCGC GAAATTCCGC
GCCGCGTTCG ACGACCTGAT CCTGCCGCGG CTGACGGCGT TCGCGCCGGA ATTGATCGTG
ATCTCGGCCG GGTTCGACGC GCATTGCCGC GATCCGTTGG CCAGCCTCAA CCTGCAGACC
GAGGATTTCG CCTGGGTGAC GCAGAAGCTG ATGGACGTCG CTGATTTGAG CGCCGGCGGG
CGTATCGTCT CGGTGCTGGA AGGCGGTTAT GATTTGCAAG GCTTGCGGGA ATCGGTGAAT
GCCCATGTCG GCGCCCTGAT GGGCTCATGA
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| Protein sequence | MTTLFINHPA CLEHDTPYGH PERADRLRAV NQGLAEARFS ALQRSEAPEA DLDTIALCHT
DHHIVELRQM SPQTGLIFVD SDTSMSPGTW EAALRSVGGA VAATDAVMTG QVHNAFVATR
PPGHHAEIGK PMGFCFFGNA AIAARYAQRK YGIGRAAVVD FDVHHGNGTQ EIFWGDKTVM
YCSTHQMPLF PGTGAVGERG EHDNIVNAPL QSEDGTAKFR AAFDDLILPR LTAFAPELIV
ISAGFDAHCR DPLASLNLQT EDFAWVTQKL MDVADLSAGG RIVSVLEGGY DLQGLRESVN
AHVGALMGS
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