| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1148 |
|---|
| Symbol | |
|---|
| ID | 3969505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1248762 |
|---|
| End bp | 1249328 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637924258 |
|---|
| Product | nucleoside 2-deoxyribosyltransferase |
|---|
| Protein accession | YP_531030 |
|---|
| Protein GI | 90422660 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG3613] Nucleoside 2-deoxyribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCT ATCTCGCCGG TCCCGACGTG TTTCTGCCGG ACGCCGCCGA GATCGGCCGG
CGCAAGCAGG CGATCTGCGC CCGCCATGGC ATGACCGGGC TGTACCCGCT CGACAACGCG
TTCGACGCCG CCGCGCCGCA GCTGTCGCTG AGCATCTTCC GAAGTAACGA GGCGATGATG
CTCAAGGCGC AAGCGATCGT CGCCAACCTC ACCCCGTTCC GCGGCCCCAG CGCCGACGCC
GGCACGGTCT ATGAGCTCGG CTTCATGGCC GGGCACGGCA AGCTCTGTCT CGGCTATTCC
AACGACCCCT TGCCCTACCC GAAGCGCGTC GCGGCGCGCG GCGCGGTGAG CGCGCGTGAC
GGCGTGCTGC GCGACGCCCA CGGCCATGTG GTGGAGGATT TCGGCCTCGC CGACAATCTG
ATGATCGCGC ATGCGCTGGA TCTGCATGGT TGCGCGCTGG TCACGCCGCA GCACGCACCT
GATGATCTGT GGCAGGACCT CGCAGCCTTC GAGGATTGCG TGCGGTTGGC GGCGGCGCGG
CTGTTGCCGA CGCAGGCGTC GCGATGA
|
|---|
| Protein sequence | MLIYLAGPDV FLPDAAEIGR RKQAICARHG MTGLYPLDNA FDAAAPQLSL SIFRSNEAMM
LKAQAIVANL TPFRGPSADA GTVYELGFMA GHGKLCLGYS NDPLPYPKRV AARGAVSARD
GVLRDAHGHV VEDFGLADNL MIAHALDLHG CALVTPQHAP DDLWQDLAAF EDCVRLAAAR
LLPTQASR
|
|---|
| |