| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1135 |
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| Symbol | |
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| ID | 3969530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1235906 |
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| End bp | 1236694 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924246 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_531018 |
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| Protein GI | 90422648 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.768597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCCCG AGACTCCGAA AGCTAGGCCG GCGACCGCGC TCGCCGACAG CAACGCGCCG
CGCCGCACGC TGCTGCTGAC CGGCGCCAGC CGCGGCATCG GCCACGCCAC CGTGATCCGG
TTTTCCAGCG CCGGCTGGCG CGTCATCACC TGCTCGCGGC ATCCGTTTCC GGAGGAATGC
CCGTGGGGCG CGGGTCCCGA GGACCACATC CAGGTCGATC TCGCCGACCG CGCCGACACC
GTGCGGGGAA TCGCCGAAAT CCGCGAACGG CTGGACGGCG GACAATTGCA CGCCCTGGTC
AACAACGCCG CGATCTCGCC GAAGGCCGCC GGCGGCGGCC GGATGGGCTC GATCGACACC
GAGATCGACA CCTGGGAGCA GGTGTTCCGG GTGAATTTCT TCGCGCCGAT CATGATGGCG
CGCGGGCTGA TCGAGGAATT GAAGGCCACC AAGGGCTCGG TGGTCAACGT CACCTCGATC
GCGGGCTCCC GGGTGCATCC GTTCGCCGGC GCCGCCTACG CCACCTCGAA GGCGGCGCTG
GCGTCGTTGA CCCGCGAGAT GGCCTCGGAT TTCGGCCATG TCGGGGTGCG GGTCAATTCG
ATCGCGCCCG GCGAGATCGA CACCTCGATC CTGTCGCCCG GCACCGACAA GATCGTCGAG
GAACAGATCC CGCTGCGGAG GCTCGGCACC CCGGACGAGG TCGCGAAAAT CATCTACGTG
CTGTGCACCG AGACCTCGTC CTACGTGAAC GGCGCCGAGA TCCACATCAA CGGCGGCCAG
CACGTGTAG
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| Protein sequence | MSPETPKARP ATALADSNAP RRTLLLTGAS RGIGHATVIR FSSAGWRVIT CSRHPFPEEC
PWGAGPEDHI QVDLADRADT VRGIAEIRER LDGGQLHALV NNAAISPKAA GGGRMGSIDT
EIDTWEQVFR VNFFAPIMMA RGLIEELKAT KGSVVNVTSI AGSRVHPFAG AAYATSKAAL
ASLTREMASD FGHVGVRVNS IAPGEIDTSI LSPGTDKIVE EQIPLRRLGT PDEVAKIIYV
LCTETSSYVN GAEIHINGGQ HV
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