Gene RPC_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1107 
SymbolmotB 
ID3969541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1209280 
End bp1210551 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID637924218 
Productflagellar motor protein MotB 
Protein accessionYP_530990 
Protein GI90422620 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.408122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC AAGACCGACC CGAACTGATC ATCATTCGGC GCCGCAACTC GCTCGACGTC 
GAAGAGAAGA ATGGCGTCTG GAAGATCGCC TATGCCGACT TCATGACGGC GATGATGGCG
TTCTTCCTGG TGATGTGGCT GATCAACGCC ACCAACCCGG AGACGCGCGA GAGCGTCGCC
GCCTACTTCA ACCCGATCAA GCTGACCGAC TCGACGCCCG ATCGCAAAGG CATCCATGAT
CCGCGCCGGG TCGATCCCGG CAAAGCGGAC GAGGGCGACA ACGAGCGGCC GCACCCCGAG
CCGGACAACG CCGCGCAGCC GGCGCCGCGT CAGCAGCCGG AGCAATCGCA CCCCGACGAA
GCCGCGCTGT TCCGCGATCC CTATGCGGTG CTGTCGGAAA TCGCCGGCGG CCCGCCGCGC
GCAGCCCAGG CCGGAAGCGC GCCGGAGGCG ACGCGCAAAG ATGGAATGAA AGGCGGCGAG
GCCTATCGCG ATCCGTTCGA TCCGATCAGC TGGCCGATGG CGCAGACCTC GCCGCTCGAC
GACAAGGCGT TGGGCCGCAA GGAAGCCGGC AACCTGCCGT TCGACGAGGC CGCCGCGGCG
CTGAGCGAAG GCCAGGGTCG TCGCCCGTCG CAAGGCACCC CGGACGCCAC GGCGGCGCCT
CAGGATGCCG AACCGCCGAA AGCCGCGCCG GCTTCGTCCG AACCGCAGCA GGATCGGCCG
AGGCCGGTCG GGTTGTTCGC CGACGACGCA ACGAAGACCG GCGCGCCCGG CAATCGTCCG
GCCGGGGCGC GTGGCGACAC CACGCCGGCG GCGAATGCCG CGGGCAAGTT GCAGGCGACG
ATCACCGCCG CGCTGGCGAC GCTGGGCGCG GCGCGCCCGG TCACCGAGGT CCGCGAGACC
ACCGAGGGCC TGCTGATCAG CCTGACCGAC GACGTGAATT ACGGCATGTT CGCCACCGGG
TCGGCGGCGC CATCGCCCGG TCTGGTTCGT GCGCTCGACA AGATCACGCC GCTGATCGCG
CAGAATCGCG GCCAGATGAT CGTGCGCGGC CACACCGACA ACCGCGCCTA TCGCTCGGCA
GAATACGACA ATTGGCGGCT GTCCACGGCC CGCGCGCACA TGGCCTATTA CATGTTGATC
CGCGGCGGCC TCGACGCCGG GCGGATCGAG CGGATCGAGG GCTACGCTGA TCGCCGTCCG
AAAGACCCGA ACGATCCGTC GGCGGCGCCG AACCGCCGGA TCGAGCTGCT GATCCGCGCG
CCGACGCCAT GA
 
Protein sequence
MAEQDRPELI IIRRRNSLDV EEKNGVWKIA YADFMTAMMA FFLVMWLINA TNPETRESVA 
AYFNPIKLTD STPDRKGIHD PRRVDPGKAD EGDNERPHPE PDNAAQPAPR QQPEQSHPDE
AALFRDPYAV LSEIAGGPPR AAQAGSAPEA TRKDGMKGGE AYRDPFDPIS WPMAQTSPLD
DKALGRKEAG NLPFDEAAAA LSEGQGRRPS QGTPDATAAP QDAEPPKAAP ASSEPQQDRP
RPVGLFADDA TKTGAPGNRP AGARGDTTPA ANAAGKLQAT ITAALATLGA ARPVTEVRET
TEGLLISLTD DVNYGMFATG SAAPSPGLVR ALDKITPLIA QNRGQMIVRG HTDNRAYRSA
EYDNWRLSTA RAHMAYYMLI RGGLDAGRIE RIEGYADRRP KDPNDPSAAP NRRIELLIRA
PTP