| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1085 |
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| Symbol | |
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| ID | 3969558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1190131 |
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| End bp | 1191948 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924196 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_530968 |
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| Protein GI | 90422598 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.385965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCACG CCCTACCATT CGTCATAGGA ACGATCTGCG TTCTGACGAT CTGCTATCGC
TTCTACGGCA TCTTCTTCGT TCGCAAGGTG TTGCAGGCGG ACGACGGACA AGTCACCCCC
GCCCATTCCA TGAAGGACGG ACGCAATTTC GTCCCGACCC GGAAATGGGT GAATGCCGGT
CAGCATTTCG CCGCGATCGC GGCGGCTGGC CCGCTGGTGG GGCCGGTGCT TGCCGCCCAG
TTCGGCTATC TGCCGGGCTT CCTGTGGCTG CTGATCGGTG CGTGTATCGG CGGCGCGGTG
CACGACACCG TGGTGCTGTT CGCCTCGATG AAGTATCGCG GGCAGTCGCT CTCCGAAGTG
GCCAAAGCCG AGCTCGGTCC GGTCGCCGGT TGGTGCACCG GGATCGCGAT GCTGTTCATC
ATCACCATCA CGATGGCCGG ATTGTCCATG GTCGTGGTGC ATGCGCTGGA ACGCAACGCC
TGGGGCACCT TCGCGGTGCT GATGACCATT CCGATTGCGA TGGCGGTGGG AACTTACGAG
AAGCTCACCG GACGTTCCAA AGGCGCCACC TATTTCGGGG TGTTCGCGAT CATCGCTGCC
GTGTTCATCG GGCCCTATCT GCAGGGCACC ATGCTGGGCG ACTGGCTGAC CGTGCATGAG
CGGACGGTAT CGCTCGCCAT CCCGGCCTAT GCGTTCTTCG CCACCGCTCT GCCGGTGTGG
TTGCTGCTGA CGCCGCGCGG TTATCTGTCG AGCTTCATGA AGATCGGGGT GTTCGGTGCG
CTGATCGTCG GCGTGGTGTT CATCAACCCG GTGGTGCAGT TCCCGGCGTT GACCGACTTC
ATCCATGGCG GTGGCCCGGT GATCGGCGGC CCGGTGTGGC CCTTCATCTC CATCACCATC
GCCTGCGGCG CGATCTCCGG TTTCCATGCC TTCATCGGCT CCGGCACCAC GCCGAAGCTG
GTCGACAAGT GGAGCGACAT CCTGCCGGTG GCATTCGGCG CGATGCTGGC GGAATGCGTG
GTCGGCGTGA TGGCGCTGAT TGCCGCCACC GTGCTGCACC CGGCGGACTA CTTCGCCATC
AACGCCTCGC CGGCGGTGTT CCAGGCGCTC GGCATGACGG TTGTTGACCT GCCGCGGCTC
AGCCAGGAGA TCGGCATGGA TCTCTACGGC CGCACCGGCG GCGCCGTGAC GCTCGCCGTC
GGCATGACGG AGATCTTCAC CAAGCTGCCG TGGTTCACGC ACCTCGCCTC GTACTTCTTC
CAGTTCGTGG TGATGTTCGA AGCGGTGTTC ATCCTGACCG CCGTCGACTC CGGCACCCGC
GTCGCCCGCT ACCTGATCCA GGATCTCGCC GGCGAAGTGT ACAAGCCGTT CAAGCGGCTC
GACTGGATGC CGGGCGCGCT CGGTGCCAGC CTGCTCGCCT GCCTGCTGTG GGGCTACCTG
TTGAACTCCG GCGACATCAA CTCGGTGTGG ACGTTGTTCG GTGTGTCGAA CCAGCTGATG
GCCTCGATCG GCCTGATGGT CGGCGCCACC ATCATCCTGC GCCTCGCCCA GAAGCGGATC
TACATGCTGA CCTGCCTGGT GCCGCTCGCC TATCTCTACG TGACGGTGAA CTATGCGGGC
TATTGGATGA TCAGCAACGT CTACCTGAAC CCGGCTGCGA AGGGCTACAA CCTGTTCAAT
GCGGGAATTT CCATCATCAT GCTGACGCTC GGCGTGGTGA TCATGGTGGC GTCGCTATGG
CGCTGGAAGA AGCTGCTGCG GAGGGCACCC AGCAACACCG ATGCCGGCTC GCTGCTGGCG
ACCGCCACCG CCAGCTGA
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| Protein sequence | MIHALPFVIG TICVLTICYR FYGIFFVRKV LQADDGQVTP AHSMKDGRNF VPTRKWVNAG
QHFAAIAAAG PLVGPVLAAQ FGYLPGFLWL LIGACIGGAV HDTVVLFASM KYRGQSLSEV
AKAELGPVAG WCTGIAMLFI ITITMAGLSM VVVHALERNA WGTFAVLMTI PIAMAVGTYE
KLTGRSKGAT YFGVFAIIAA VFIGPYLQGT MLGDWLTVHE RTVSLAIPAY AFFATALPVW
LLLTPRGYLS SFMKIGVFGA LIVGVVFINP VVQFPALTDF IHGGGPVIGG PVWPFISITI
ACGAISGFHA FIGSGTTPKL VDKWSDILPV AFGAMLAECV VGVMALIAAT VLHPADYFAI
NASPAVFQAL GMTVVDLPRL SQEIGMDLYG RTGGAVTLAV GMTEIFTKLP WFTHLASYFF
QFVVMFEAVF ILTAVDSGTR VARYLIQDLA GEVYKPFKRL DWMPGALGAS LLACLLWGYL
LNSGDINSVW TLFGVSNQLM ASIGLMVGAT IILRLAQKRI YMLTCLVPLA YLYVTVNYAG
YWMISNVYLN PAAKGYNLFN AGISIIMLTL GVVIMVASLW RWKKLLRRAP SNTDAGSLLA
TATAS
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