| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1077 |
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| Symbol | |
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| ID | 3969589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1179141 |
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| End bp | 1179821 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924188 |
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| Product | 3-oxoacid CoA-transferase, subunit B |
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| Protein accession | YP_530960 |
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| Protein GI | 90422590 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.135615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCAG CCAAGAAACT GAGCCGCGAT CGCGTCGCGC AGCTGACGGC GCAGGACATC
GCCCCCGGCA GCTACATCAA TATCGGCCTC GGCATCCCGA CGCTGGTGCC GAAATATCTC
GACCCGAAGA AAGAGGTGGT GCTGCACAGC GAGAACGGCA TTCTCGGCCT CGAAGGCCTG
CAGCCCGGCC TGCCCGGCGA CGACGATCTG ATCAACGCCA GCAAGCAGCA CGTGCAGCTG
ATCCTGGGTG CCTCGATCGT CGATCAGTCG CTGTCGTTCG CGATGATGCG CGGCGGCCAT
CTCGACGCCA CCATTTTGGG CGCGTTCCAG GTGGCGATGA ACGGCGATAT CGCCAGCTGG
TCGACCGGCG CCAAGGACGA CATTCCGGGC ATCGGCGGCG CGATGGATCT GGTGGCGGGC
TCCCGCCGCG TCATCGTGGT GATGGAGCAT CTGGCGCGGG ACGGTGCGCC CAAGTTGATG
AAGGCGTGTA GTTACCCGCT GACCGGGCTT GGCGTCGTCA CCAACATCTA CACCGATATG
GCGATCATCG ATGTCGATCC GTCGCGCGGC TTCATCGTCC GCGGCATCGC CGAGGGGCTG
ACCCGCGACG AATTGCAGGC GGCCACCGAC GCGCCGCTGA TCTATGCCGA CGACGTGGCC
GTGCTCACCG AGCACGCATA G
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| Protein sequence | MAAAKKLSRD RVAQLTAQDI APGSYINIGL GIPTLVPKYL DPKKEVVLHS ENGILGLEGL
QPGLPGDDDL INASKQHVQL ILGASIVDQS LSFAMMRGGH LDATILGAFQ VAMNGDIASW
STGAKDDIPG IGGAMDLVAG SRRVIVVMEH LARDGAPKLM KACSYPLTGL GVVTNIYTDM
AIIDVDPSRG FIVRGIAEGL TRDELQAATD APLIYADDVA VLTEHA
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