| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1076 |
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| Symbol | |
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| ID | 3969588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1178474 |
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| End bp | 1179139 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924187 |
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| Product | 3-oxoacid CoA-transferase, subunit A |
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| Protein accession | YP_530959 |
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| Protein GI | 90422589 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.190915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAACA AGATAGCTTC GTCCCTGGCC GACGCCGTCG CGCCGATCAG CGATGGCGCC
TCGGTGATGA TCACCGGCTT CGGTGATTCC GGCCTGCCGC GCGAACTGAT CGACGCGTTG
ATCGCCCACG GCGCGGGTGA TCTCACGATC ATCAGCAACA ATGCCGGCAC CGAACGCGTC
GGTCTGGCGC GTCTGCTCGA ACTCGGGCGG GTGCGCAAGA TCGTCTGCTC CTATCCGAAA
TCGTCGGGCT CGGTGGTGTT CACGGAGTTG TACCGCGCCG GCCGCATCGA GCTGGAGTTG
GTGCCGCAGG GCACCTTGCT GGAGCGGATG CGCGCCGCTG GCGCCGGGCT CGGGCCGTTC
TTCACCCCGA CCGGCTACGG CACCACGATC GCCGACGGCA AGGAGCAGCG CGTGGTCGAC
GGCAAGGGCT ATCTGCTGGA GCAGCCGCTG GCGGCCGACT TCGCGCTGGT GAAGGCCTAT
CACGCCGATC GCTGGGGCAA TCTCACCTAT CGGCTCGCGG CGCGCGGCTT TGGGCCGGTG
ATGTGCATGG CCGCCAAGAC CACGATCGCC CAGGTCGACG ACATCGTCCC GTTGGGAACC
ATCCCGCCGG AATCCGTGGT CACCCCCGGA ATCTTCGTCA GTCGCGTCGT ACGGAAGGAT
GCTTGA
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| Protein sequence | MINKIASSLA DAVAPISDGA SVMITGFGDS GLPRELIDAL IAHGAGDLTI ISNNAGTERV
GLARLLELGR VRKIVCSYPK SSGSVVFTEL YRAGRIELEL VPQGTLLERM RAAGAGLGPF
FTPTGYGTTI ADGKEQRVVD GKGYLLEQPL AADFALVKAY HADRWGNLTY RLAARGFGPV
MCMAAKTTIA QVDDIVPLGT IPPESVVTPG IFVSRVVRKD A
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