| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1075 |
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| Symbol | |
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| ID | 3969587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1177053 |
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| End bp | 1178477 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924186 |
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| Product | major facilitator transporter |
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| Protein accession | YP_530958 |
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| Protein GI | 90422588 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.561566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACGA TCAAACAACC AGGGGCGACG GATGCGCCGG CATCCGAGGC GGCCGGACAT
GTCTATCGCA AGATCACGCT CCGCCTGATT CCCTTTCTGT TTGCTTGCTA CGTGCTGAAC
TACATCGACC GCGTCAACAT CAGTTTCGCC AGCCTGCAGT TCCGCCAGGA TCTCGGCATC
AGCGCCGCGG CCTACGGCTT CGGCGTCGGC ATCTTCTTCG TCGGCTACAT CCTGTTCGAG
ATCCCGAGCA ATCTGCTGAT GCAGCGGATC GGGGCGCGCC GCACCATGAT GCGCATCATG
GTGCTGTGGG GCCTGGTCTC GATCTCGACG ATGTTCGTCA CCTCGGCGAC GCAGTTCTAT
GTGGTGCGCG CGCTGCTCGG CATCGCCGAG GCCGGGTTCT TTCCCGGCGT GGTGTTCTAT
CTGACGCTGT GGTTTCCCTC GGCGATGCGC GGCCGGATCA TGGCGATGTT CGTGCTGGCG
ATCGCGGTGT CGGGCGTGAT CGGCGGCCCG GTGTCCGGAC TGATCATGAG CCAGATGGCG
GATTTCGCCG GGCTCAAGGG TTGGCAGTGG CTGTTCCTGA TCGAAGGCAT TCCGCCGGTG
CTGGTCGGCA TCATGGCTTA CTTCTATCTC GACGACGGCC CGGAGCACGC CAAATGGCTG
AACGCTGAGG AGAAGCGCTT CGTCATCGGC AATCTGGCCA TCGAAGCGGC CTCCCGCGAG
AGCAGCAAGC ACGGCACCTT CTGGACCGCG GTCCGCGATC CAAGGCTTTA TGCCGCTGCG
ATCGCCTGGT TCACCGTGGC GTGGTGCGGC TCGGTGATCA ATTACTTCTC GCCGACCATC
ATCCGCAACT CCGGCGTGTC GGATACGCTG ATGGTCGGTT TGCTGTCCGC GATTCCCTAT
GCGGTCGGCG CGCTCGGCAT GGTGCTGATC AACCGGCATT CCGACCTCAA GCTGGAGCGG
CGCTGGCACT ATGCGTGCAG CGTGTTCCTG GCGGCGGCCG CGATTGCGCT GTTGCCCTCG
GTGGCGCAGA ATTGGAAACT GGCGATCGCC CTGCTCGCGG TGCTGTCGGT CGGCTATCTC
GGATCGGTGG CGCTGTTCTG GTCGATCCCG ACCGCCTATC TGTCGAAGAA GGCGTCGGCC
GGCAGCATCG CGCTGATCAG CAGCATCGGG CAATGCGGCG GCCTCACCGC GCCGAACATC
ATCGGCTGGA CCCAGCAGGC CACCGGCGAC TTCGCGCTCG GCTTCTACAT CATTGCCGTC
GGCATGGTCA CCGGCACCGT CATCATGCTG CTCGGCCTGC CGGCCCGCTT GTTGCACGAA
CGCTATATCG GCCACGCACC GGCCGAACGC AGCCCCGGCG CATCGCACGT CGGACATTTC
CCACCGGCGG GTCCCGCCAA GCCCTCGACC GAGGCCGCGA CATGA
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| Protein sequence | METIKQPGAT DAPASEAAGH VYRKITLRLI PFLFACYVLN YIDRVNISFA SLQFRQDLGI
SAAAYGFGVG IFFVGYILFE IPSNLLMQRI GARRTMMRIM VLWGLVSIST MFVTSATQFY
VVRALLGIAE AGFFPGVVFY LTLWFPSAMR GRIMAMFVLA IAVSGVIGGP VSGLIMSQMA
DFAGLKGWQW LFLIEGIPPV LVGIMAYFYL DDGPEHAKWL NAEEKRFVIG NLAIEAASRE
SSKHGTFWTA VRDPRLYAAA IAWFTVAWCG SVINYFSPTI IRNSGVSDTL MVGLLSAIPY
AVGALGMVLI NRHSDLKLER RWHYACSVFL AAAAIALLPS VAQNWKLAIA LLAVLSVGYL
GSVALFWSIP TAYLSKKASA GSIALISSIG QCGGLTAPNI IGWTQQATGD FALGFYIIAV
GMVTGTVIML LGLPARLLHE RYIGHAPAER SPGASHVGHF PPAGPAKPST EAAT
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