| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1074 |
|---|
| Symbol | |
|---|
| ID | 3969586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1175842 |
|---|
| End bp | 1176996 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637924185 |
|---|
| Product | thiolase |
|---|
| Protein accession | YP_530957 |
|---|
| Protein GI | 90422587 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC GGACGCGTGG CCATGCGGCC GTCGTCGGCG TGGCCGAATC CGATCTCGGC
ATCGTCGGAC CGCACATGAC GCCGGTCGAT CTGATGGCGC AGGCGACGAT GCGCGCGCTC
GACGACTGCG GCCTCAAGCT CAGCGACGTC GACGCGGTGT TCGCCGCCAG CGCGCAGGTG
CGGTTCGGGC CGATGATGCT CTGCGAGTAT CTCGGGCTCA ATCCGCGCAC CATCGACGGC
ACCCAGATCG GCGGCTCCTC GTTCATGTCG CATCTGGCGC ATGCGGTGGC GGTGATCGAG
CTCGGGCTGT GCGAAGTGGC GCTGATCGCC TATGGCAGCA CGCAGCGCTC GGTGTCGCGC
GCCGCCGCGT CGCCGACCGA TATCAATCCT TACGAGGCGC CGTTTCGGCC GGTGATGCCG
GCGAGCGCCT ACGCGCTGGC CGCCGCCCGA CACATGTATC AGTTCGGCAC CACGCGCGAG
CAGCTCGCCG ACGTCGCGGT CGCGGCGCGG CAATGGGCGC TGCTCAATCC GAAGGCCTGG
GAGAAAGAAC CGCTCAGCCG CGAGCAGGTG CTGGGCGCGC GGATGCTGTC GGACCCGCTC
ACCGTGCGCG ACTGTTGCCT GGTGCTCGAC GGCGGCGGCG CCATGATCGT GACTTCGGCG
GCGACCGCGC GCGATTGCCG CAAACTGCCG ATCCATGTGC TCGGCACCGG CGAAGCCATC
GGCCACGGCT CGATCTCCGG CATGGCCGAC CTCACCACCA CGGCCGCCGC GGTCTCCGGG
CCGCGCGCCT TTGCGGCGGC GGGCTTAGCG CCGGCCGACA TCGACGTCGC GCTGCTATAC
GACGCCTTCA CCATCACGCC GATCCTGTTT CTCGAGGATC TCGGCTTCTG CGCCAAGGGC
GAGGGCGGTT CTTTCGTGCA GGACGGTGGC ATCGCGCCGG GCGGTCGCCT CGCCGTCAAC
ACCAATGGCG GCGGGCTGTC CTACTGCCAT CCCGGCATGT ACGGCCTGTT GGCGATGATC
GAATGCGTCC GGCAGCTGCG CGGCGAATGC GGCGCCAGGC AGCTCGCCAA GCACAACGTC
GCACTGGCGC ACGGCAATGG CGGGGTGCTG TCCAGCCAAT GCACCGCGAT CTTCGGCACA
CCGGCGGCGC TGTAG
|
|---|
| Protein sequence | MTTRTRGHAA VVGVAESDLG IVGPHMTPVD LMAQATMRAL DDCGLKLSDV DAVFAASAQV
RFGPMMLCEY LGLNPRTIDG TQIGGSSFMS HLAHAVAVIE LGLCEVALIA YGSTQRSVSR
AAASPTDINP YEAPFRPVMP ASAYALAAAR HMYQFGTTRE QLADVAVAAR QWALLNPKAW
EKEPLSREQV LGARMLSDPL TVRDCCLVLD GGGAMIVTSA ATARDCRKLP IHVLGTGEAI
GHGSISGMAD LTTTAAAVSG PRAFAAAGLA PADIDVALLY DAFTITPILF LEDLGFCAKG
EGGSFVQDGG IAPGGRLAVN TNGGGLSYCH PGMYGLLAMI ECVRQLRGEC GARQLAKHNV
ALAHGNGGVL SSQCTAIFGT PAAL
|
|---|
| |