| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1056 |
|---|
| Symbol | |
|---|
| ID | 3969627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1161690 |
|---|
| End bp | 1162553 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637924167 |
|---|
| Product | biotin--acetyl-CoA-carboxylase ligase |
|---|
| Protein accession | YP_530939 |
|---|
| Protein GI | 90422569 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCT TCGATGACAT CATTCCTGAC GCGACACGCC TCGGCGCTGC CCAGCGGGTC
TATGGCATCG GGCGGACCGT TCTTCATGTC GCCGAGATCG ACAGCACCAA CCGCGCGATG
ATCCTGCTCG GCCAGTCCGG TGCCGAGCAC GGCACCGTGC TTGTCGCCGA TCATCAGACC
CGCGGCCGCG GCAAGGGTTC GCGGGCGTGG TTTTCGCGGC CAGGCGGCAG TCTGTGCGTC
TCTGTCCTGA TCCGGACGGG GCGGGGGTTT CAGGACGCCC CTCAACTGGC GCTGCTCGGT
GCGGTGGCGC TGTGGGAAGC CGTCGCCGAT CAGACCCGCA TTGCGGCCGG CATCAAATGG
CCGAACGACC TGCTGGTCGA CGGTCGCAAG ATCTGCGGCA TCCTCGCCGA AGCGCACAGC
GATCCGGCCG GCGATCTCGA CTTCGTCGTG CTCGGGTTCG GTCTCAACGT TGCGATCGAG
CAGCGCGACT TTCCGGACGA ACTACGTGAC TCGGCGATTT CGCTTTCGAC GTTGGCCGGA
GCCGCCGTGG ACCCCACGGG GCTGCTCAAC AGCTTCCTCG ATTCGCTGAA GGTGTGGCTG
CCGCTGTGGG AAAGCGTCGG GGTGTCGGCG TTTGCCAGCA CCTGGACGCG GCATGCGGAA
CATCTCGGAC AGATCGTCCG GATCACCGAT GGCGATGAAC CGATCACCGC TCGACTTCTC
GGCCTCGCCG ACGACGGGGC CCTGCGCATC TTAGACGAGA CGGGATCTAT CCGCCTCGTT
CACTCCGGCG AAATCGCCAC GGGCATCTCC GTTGGCCGGG GGCCCGACCA AATCTCCATG
AAACACACGG GTGTACTCTC ATGA
|
|---|
| Protein sequence | MIRFDDIIPD ATRLGAAQRV YGIGRTVLHV AEIDSTNRAM ILLGQSGAEH GTVLVADHQT
RGRGKGSRAW FSRPGGSLCV SVLIRTGRGF QDAPQLALLG AVALWEAVAD QTRIAAGIKW
PNDLLVDGRK ICGILAEAHS DPAGDLDFVV LGFGLNVAIE QRDFPDELRD SAISLSTLAG
AAVDPTGLLN SFLDSLKVWL PLWESVGVSA FASTWTRHAE HLGQIVRITD GDEPITARLL
GLADDGALRI LDETGSIRLV HSGEIATGIS VGRGPDQISM KHTGVLS
|
|---|
| |