| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1054 |
|---|
| Symbol | |
|---|
| ID | 3969625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1159401 |
|---|
| End bp | 1160303 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637924165 |
|---|
| Product | triphosphoribosyl-dephospho-CoA synthase |
|---|
| Protein accession | YP_530937 |
|---|
| Protein GI | 90422567 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1767] Triphosphoribosyl-dephospho-CoA synthetase |
|---|
| TIGRFAM ID | [TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGGA CCATCGGTTC GGCCTGCCTT AGCGGCATCC TGCTCGAAGT ATCAGCTCAT
CCGAAGCCCG GTCTGGTGAC TGCGCGCTCG ATGGGCGCGC ATGCCGACAT GGATCAGCAG
ACCTTCATGT TGACCTCCGC GGCGATCGCG CCGTGCTTCC ATCGCTGCGC GGCGATCGGA
CTATCCCTTG AAGGCTGTGC TGCCGCGGCG GTGTTGCCCG CAGTGCGCGC CGTCGGTCGG
GAGTATGACG CGTTGTTGTT GGCGGCGTCG AACGGCGTCA ATACCCAACG CGGCGCGCTG
TTTGCGCTCG GTATCACCGC CGCCGCGGCC GGCCGCGCGC AGCGCGGCGA AGCGGCGCCG
AATTCCACGC AGATCTTCGC CGAAGTTGCG GCGATCACGC AGGGCCTGGT GCAGCGCGAG
TTGATCGAGC GGCGCGACGA TCCGGCGACC GCCGGCGAAC AGCTGCACGC CCGCTATGGC
GCGCGCGGCA TTCGCGGCGA GGTCGAGGAC GGTTTTCCGA CGGTGGCCGC GCATGGTCTG
TCGACGCTAC GCGCCGCGAT CGATGCCGGC CACGGCCTCA ACCGCGCGCT GGTGCACACC
CTGATCCATC TGATCGCCGA GACCGAGGAC ACCACGGTGC TTTGGCGCGG CGGCCCCGAT
GCGCTCGCGT TCGCGCGCGA CCGCGCCCGC CGCATCCGCG ATCTCGGCGG CGCGCTGACC
GACGATGGGA TCGCTCGAAT TCACGCCTTC GGCGACGCGT GCGTCGCGCG ACGGATCAGT
GCCGGCGGTG CCGCCGATCT GCTCGCAGTC ACCATCGCCG TCCATCTCAT CGAGCGCGGG
TCGTTTCCGG TCTCGGCGAC GACCGGCTTC GAAGCCCTTC ATGCAACTGG AGACTACCAA
TGA
|
|---|
| Protein sequence | MAWTIGSACL SGILLEVSAH PKPGLVTARS MGAHADMDQQ TFMLTSAAIA PCFHRCAAIG
LSLEGCAAAA VLPAVRAVGR EYDALLLAAS NGVNTQRGAL FALGITAAAA GRAQRGEAAP
NSTQIFAEVA AITQGLVQRE LIERRDDPAT AGEQLHARYG ARGIRGEVED GFPTVAAHGL
STLRAAIDAG HGLNRALVHT LIHLIAETED TTVLWRGGPD ALAFARDRAR RIRDLGGALT
DDGIARIHAF GDACVARRIS AGGAADLLAV TIAVHLIERG SFPVSATTGF EALHATGDYQ
|
|---|
| |