| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1035 |
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| Symbol | |
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| ID | 3969645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1135055 |
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| End bp | 1136698 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924147 |
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| Product | cyclohexanecarboxylate-CoA ligase |
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| Protein accession | YP_530919 |
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| Protein GI | 90422549 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTCG ATGCCATCCT GCTGCCGGCA CGTCGTGCCG AAAGCATCGC CCGGGGCCAT
TGGCACGATC GCACCATCAA CGACGATCTC GACGCCTGCG TCGCCGCTTG CCCAGACAAG
ACCGCGCTCG CGGCCGTGCG TCTCGACGGT GACCAGACCC GCCGATTCAG CTATCGCGAA
CTCGCCACGC TTGCCGACCG CGTCGCGGTC GGGCTGTCGC GACTCGGCGT CACTCGCAAC
GACGTCGTCG CGATGCAATT GCCGAATGGC TGGCAGTTCA GCGTCCTTTA TCTGGCCTGT
TCGCGGATCG GCGCGGTGCT CAATCCGTTG ATGCCAATTT TCCGCGAGCG CGAATTGTCG
TTCATGCTGA AGCACGGGGA GGCCAAGGTG CTCGTCGTGC CGAAGACCTT CCGCAATTTC
GATCACGAAG CCATGACGCG CGGTCTGCAG CCGCTATTGC CGGCGCTGCA ACAGATCGTT
GTGGTCGGTG GCGGCGGCGC GGATGATTTC GAAACGCTGT TGACGATTCC GGAATGGGAG
AAGGCGCCGG ATGCGCCTGC GATCCTGACC AACCATCGCC CGGGGCCCGA CGACATCACG
CAACTGATCT ACACCTCCGG CACCACCGGC GAGCCCAAGG GCGTGATGCA CAGCGCCAAT
ACGCTGATGG CCAATATCAT TCCTTATGCG CGGCGGCTGA AGCTCAGTCA GGACGACGTC
ATCCTGATGG CGTCGCCGAT GGCGCATCAG ACCGGCTTCA TGTATGGGCT GATGATGCCG
ATCATGCTGC AGGCGAGCGC CGTGCTGCAG GATGTCTGGG AGCCGGCGAA GGCGGCCGAA
CTGATCCGCA CTGAGCGCGT CAGTTTCACC ATGGCCTCGA CTCCGTTCCT GACCGATCTC
ACGCGGGTCG TGAAAGAGAG CGCCCTGCCT GTTCCGAGCC TGAAAACCTT TCTCTGCGCC
GGCGCGCCGA TTCCGGGGCC GCTGGTCGAA CAGGCGCAAG CAGGCCTCGG TGCGAAAATC
GTCTCCGCCT GGGGTATGAC AGAGAACGGC GCGGTCACGC TCATCACACT CGACGACGAC
GACAAGCTGG CGTCGACCAC CGACGGCTGC CCGCTGCCCG GCGTCGAAGT GAAGGTGATC
GATGGTGACG GCGCCGCGCT GCCCGCGGGG CAGATCGGAC GCCTCGTGGT GCGGGCATGC
TCGAATTTCG GCGGCTATCT GCGACGCCCG CAATGGAACG CCACCGATGC GGAGGGCTGG
TTCGATACCG GCGACCTCGC CTACATGACC CCCGCCGGCT ACATCCGCAT CAGCGGCCGC
AGCAAGGACG TCATCATCCG CGGCGGGGAG AACATCCCGG TCGTCGAAGT TGAAGCGCTG
CTCTACAAGC ATCCCGCCGT TTCCCAAGTC GCGATTGTCG CCTATCCCGA CGAGCGCCTC
GGCGAGCGCG CCTGCGCGGT CGTCGTGCTG CGGACGGGAG AGACGATTGA TTTCCGGACC
ATGGTCGAAT TTCTGAAGAC GCAAAAACTC GCGGTCCAGT ACATCCCGGA ACGGCTGATT
GTGCGCGAGG CGATGCCCGC GACCCCTTCC GGAAAGATTC AGAAATTCCG GCTGCGCGAA
ATGCTGCAGC AGAACGATCT ATAG
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| Protein sequence | MEFDAILLPA RRAESIARGH WHDRTINDDL DACVAACPDK TALAAVRLDG DQTRRFSYRE
LATLADRVAV GLSRLGVTRN DVVAMQLPNG WQFSVLYLAC SRIGAVLNPL MPIFRERELS
FMLKHGEAKV LVVPKTFRNF DHEAMTRGLQ PLLPALQQIV VVGGGGADDF ETLLTIPEWE
KAPDAPAILT NHRPGPDDIT QLIYTSGTTG EPKGVMHSAN TLMANIIPYA RRLKLSQDDV
ILMASPMAHQ TGFMYGLMMP IMLQASAVLQ DVWEPAKAAE LIRTERVSFT MASTPFLTDL
TRVVKESALP VPSLKTFLCA GAPIPGPLVE QAQAGLGAKI VSAWGMTENG AVTLITLDDD
DKLASTTDGC PLPGVEVKVI DGDGAALPAG QIGRLVVRAC SNFGGYLRRP QWNATDAEGW
FDTGDLAYMT PAGYIRISGR SKDVIIRGGE NIPVVEVEAL LYKHPAVSQV AIVAYPDERL
GERACAVVVL RTGETIDFRT MVEFLKTQKL AVQYIPERLI VREAMPATPS GKIQKFRLRE
MLQQNDL
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