| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1019 |
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| Symbol | |
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| ID | 3969668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1119591 |
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| End bp | 1121375 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637924132 |
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| Product | ABC transporter related |
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| Protein accession | YP_530904 |
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| Protein GI | 90422534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCC GCCCCAATCC CACCGTTATC GTGTTCTTTG CGCTCCTGCT AACTTGTCTC
GTGGCGCTGC CGTTCTTCAC CGGCCCCTAT CCGGTGAAGC TGATGACCCG GATCGTGATT
CTGGCCACGT TCGTCCTCAG CCTTGATCTC CTGATTGGGG TGACCGGTCT GGTCAGCTTC
GGTCATGCCG CTTTCTTCGG CTGCGGCGCC TACGCGGTCT ATTTCGTCTC GCCGGAGTCA
GAGGCCGCCA ACGTGCTCGT GGCGCTTGGC GCCGGGTTGC TGGCCGGAGG TCTGGTCGCG
TTCATCGTCG GTGCCTTTGC AACACTGACG CGGGGCTTCT ATTTCATTAT GGTGACGCTG
GCAGCGGGGC AAATGTTGTT CGCACTGTTT CATGACACCG ATATCGCCAA CGGCTCGGAT
GGAGCCTATA TCAACGTCAA GCCTGATCTG ACCATTCTCG GCTTTGGTCT ACTCGACTTC
TCAGATCGGC GACAATTCTA CTATATCTGC CTCGCGGTTC TGGTGGGAGC CTATTGCCTG
CTGTTCGCGC TGGTGCGCTC GCCGTTCGGA CGGGTATTGC AGGGCATTCG CGCCAACGAA
GTTCGGATGA GTTCGCTCGG CTACAACGCG TATCGCTACA AGCTGGCCGC GTTCACCTTG
GCGGGAATGC TGGCAGGACT GGCCGGGGCG TTATTTGCCT CGATCGACGG CTTTGTCACG
CCGGATCTGC TCAACTGGCA TCAATCCGGT TTGGCGATTA TGATGGTGGT GCTTGGAGGC
GCCGGCACTC TATTTGGGCC GATCCTCGGC GCGCTCGCGT ATGCCTCGCT TGAGGAACTG
CTCAAGACGG CAAGTATCGT CGGTCCGTTC GTGGCCGACC ATTGGCGGCT GGGGACCGGT
GCGAGCCTCA TTGTTGCGGT GTTGATGTCG CCGGACGGGC TCGCAGGCCT TCTCAAATGG
AGGCGTGCTC GCCAGGATCA GGTGCCCATT CGGCGGGATG TTGAATCCCA ACGACCGGCG
CGGGTTGCCA AGGTGTTGTC GACCACGGGG CTGAGCAAGA ATTTCAACGG ATTGGTCGCC
GTCAGCGACG TCTCGGTACG GTTTGAAGCG AACTTGGTGC ACGCCATCAT CGGGCCGAAT
GGTGCTGGGA AGACCACGTT TACAAATCTG CTCTCGGGCG CGCTTCCGGC GACGACCGGC
AGCGTGCAAA TCGACGAACT CGACGTCACA GGCTGGCCGG CCCATCGAAT CGCCCAGGCT
GGTCTGGGGC GCTCCTATCA GCGCACCAAC ATCTTCCCGC GGTTCAGCGT GCGAGAGAAC
TGCGCCCTTG CGGCCCAGGT TCATAAGGAT GAGTTTTGGC GGTTGCGCGA CGGTCACTAT
CGCGCGCAGG AGGAAGCCGC GATCAATCAT GCCCTCAGCG TGGCCGGCCT TGTCGGTCGG
GGCGACTTCA TCGCGGGACA GTTATCGAAT GGCGAACAGC GCCAACTCGA AATCGCGATG
CTGATCGCCA GCGGCGCGGA TTTGCTGATT CTCGACGAGC CGCTGGCCGG CATGGGGCCT
GAAGAGACCC AACGGGTCGT CGCACTGCTG CGCGATCTCG TCCGCGATCA TACCGTCATC
GTGATCGAGC ACGACATGGA TGCCGTGTTT GCCGCGGCCG ACACATTGAC GGTCCTGGTC
CAGGGCAAGC TGTTCGCCCG TGGACGTCCG GATGAAATCC GCTCCAACGA GGCGGTGTTG
GAGGCCTATC TCGGCCATCA CGCCAGGATG AAGGGGGCGG CATGA
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| Protein sequence | MLTRPNPTVI VFFALLLTCL VALPFFTGPY PVKLMTRIVI LATFVLSLDL LIGVTGLVSF
GHAAFFGCGA YAVYFVSPES EAANVLVALG AGLLAGGLVA FIVGAFATLT RGFYFIMVTL
AAGQMLFALF HDTDIANGSD GAYINVKPDL TILGFGLLDF SDRRQFYYIC LAVLVGAYCL
LFALVRSPFG RVLQGIRANE VRMSSLGYNA YRYKLAAFTL AGMLAGLAGA LFASIDGFVT
PDLLNWHQSG LAIMMVVLGG AGTLFGPILG ALAYASLEEL LKTASIVGPF VADHWRLGTG
ASLIVAVLMS PDGLAGLLKW RRARQDQVPI RRDVESQRPA RVAKVLSTTG LSKNFNGLVA
VSDVSVRFEA NLVHAIIGPN GAGKTTFTNL LSGALPATTG SVQIDELDVT GWPAHRIAQA
GLGRSYQRTN IFPRFSVREN CALAAQVHKD EFWRLRDGHY RAQEEAAINH ALSVAGLVGR
GDFIAGQLSN GEQRQLEIAM LIASGADLLI LDEPLAGMGP EETQRVVALL RDLVRDHTVI
VIEHDMDAVF AAADTLTVLV QGKLFARGRP DEIRSNEAVL EAYLGHHARM KGAA
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