Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1017 |
Symbol | |
ID | 3969666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1117473 |
End bp | 1118651 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637924130 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_530902 |
Protein GI | 90422532 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAACC GACGTCGTTT GTTATCTATT GGAGCGTCCG CTGGCGCCGC CTTGGCGTGC GGTCCGTTCA TTCGGTCGTC CTACGCGCAA TCGGGGCCGA TCAAGATCGG GCTGTTGCTG CCCTATAGCG GCACTTATGC CCCGTTGGGC GAAGCGATCA CCCGTGGCCT CGAGCTCTAC GTCGGGGCGC AGGGCGGGAA ACTCGCCGGA CGAAGCGTCT CGTTCGTCAA GGTCGATGAT GAGTCCGCGC CGCCCAAGGC GACCGAGTTG ACGACCAAGC TGATCCAGGG CGAGAAGGCG GACATTCTGA TGGGCACCGT GCATTCGGGC GTTGCGATGG CGATGGTCAA GATCGCGCGC GAAGACGGCA TACCGACCAT TGTGCCCAAT GCCGGTGCGG ACATCATCAC CCGCGCGATG TGCGCAGAGA ACGTGTTCCG GACCTCGTTC GCCAATGGCC AGATCGGTCG CGCTACCGGC GATGCCATGC TCAAGGCGGG ACACAAGAAG GCGGTGACGG TCACCTGGAA ATACGCCGCG GGTGAAGAAA TGGTCAGCGG CTTCAAGAAA TCCTTCAGCG CCGGAAAAGG CGAAATTCTA AAGGACATCA CCATCGCATT CCCCGACGTC GAGTTTCAGT CGGCGCTGGC CGAAGTCGCG TCGCTGAAGC CCGATTGCGT CTATGCGTTC TTCTCCGGCG GCGGCGCACT CAAGTTCATC AAGGACTACG CCGCGGCAAG ACTCGGCATT CCGCTTTGGG GACCCGGCTT CCTGACGGAC GGCGTTGAAG CCGCCGCGGG TCCGGCCGGC GACGGCATCA AGACGGTGCT GCACTATGCC GGCGATCTCG ACAACGCGGA GAATCTGGCC TTCGTTAAGT CATTCGAGGC AGCCTACAAA AGCCCACCGG ATGTGTTCGC AGTCCAGGGG TGGGATGCGG CGCAATTGCT CAATATCGGT CTGAAGGCCG TCAGCGGCGA TGTCTCCAAA CGCAAGGAAT TGAACGCCAC CATGGCGGCG GCATCGTTCA ACAGTCCGCG CGGGCCTTTC AAGCTGTCCG CAGCGCACAA TCCCGTGCAG AACTTTTACC TGCGCGAACT GAAGGGCGGC AAGAACACCC ATCTCGGCCT GGCCGCCCCT GCGGTGGCCG ACGAAGCCAA TGGCTGCAAG CTGGCCTGA
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Protein sequence | MINRRRLLSI GASAGAALAC GPFIRSSYAQ SGPIKIGLLL PYSGTYAPLG EAITRGLELY VGAQGGKLAG RSVSFVKVDD ESAPPKATEL TTKLIQGEKA DILMGTVHSG VAMAMVKIAR EDGIPTIVPN AGADIITRAM CAENVFRTSF ANGQIGRATG DAMLKAGHKK AVTVTWKYAA GEEMVSGFKK SFSAGKGEIL KDITIAFPDV EFQSALAEVA SLKPDCVYAF FSGGGALKFI KDYAAARLGI PLWGPGFLTD GVEAAAGPAG DGIKTVLHYA GDLDNAENLA FVKSFEAAYK SPPDVFAVQG WDAAQLLNIG LKAVSGDVSK RKELNATMAA ASFNSPRGPF KLSAAHNPVQ NFYLRELKGG KNTHLGLAAP AVADEANGCK LA
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