| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1006 |
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| Symbol | |
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| ID | 3969693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1105739 |
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| End bp | 1108723 |
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| Gene Length | 2985 bp |
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| Protein Length | 994 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924123 |
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| Product | putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein |
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| Protein accession | YP_530895 |
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| Protein GI | 90422525 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
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| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.190808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCAAA TTGTGCGACG CGAGCAGTTC TCGGACACGA CCTTCCTCTG GGATGTCGAG
GCGCCGGACA TCGCGGCTTC CGCCGAGCCG GGCCATTTCG TCATGCTGCG GCTTTATGAT
GGGGCCGAGC GCATCCCGCT CACCGTCGCC GACTTCGACC GCAAGAAGGG CCTCGTCACC
ATCGTCGTCC AGGCGCTGGG CAAGACCACG CGGGAAATGC GCGACAAGTT CAAGACCGGT
GACACGTTCG AGGATTTCGT CGGCCCCCTC GGGCTGCCCC AGCATATCGA CAAGGCCGGC
CACGTCGTGT TCGTCGGCGG CGGCCTGGGC GTGGCGCCGA TCTTCCCGCA ATTGCGGGCG
TTCAAGGAAG CCGGCGCGCG CACCACCGCG ATCATGGGCT TCCGCAGCAA GGATCTGGTG
TTCTGGGAGG ACAAGTTCCG CGAATACGCC GATGAACTCA TCATCTGCAC CGATGACGGC
AGCTACGGCG AGCCCGGCTT CGTCACCGCG GCGCTGAAGC GCGTCGTCGA GGAGCAGAAG
CCCGACAAGG TGGTGGCGAT CGGCCCGATG CCGATGATGC ACGCCTGCGT CGAGACCACG
CGGCCCTTTG GCGTCAAGAC CATGGTGTCG CTGAACACCA TCATGGTCGA CGGCACCGGC
ATGTGCGGCT CCTGCCGCGT CACGGTCGGC ACCGAGGTGA AATTCGCCTG CGTCGACGGC
CCGGATTTCG ACGGCCATCT GGTCGACTTC AAGGAACTGC ACGCCCGCCA AAACCGCTTC
AAGACCGAGG AAGACAAGGC GAACGAACAT TTCGCCCATG TCTGCAATCT CGAGAAGCAG
CTGATCGTCG ACGGCAAGCG CAACTACAAG AAGCTGGCGA CGCTGGCCCC GCACCAGACG
CCGATGCCGG AGCGCAACGC GCAGGATCGC GCCACCAATT TCAAGGAAGT CAATCTCGGC
TATTCGGTCG AGGAGGCGCT GCGCGAGGCC GAGCGCTGCA TCCAATGCAT CGAACCGACC
TGCATCGCCG GCTGCCCGGT GGGCATCGAT ATTCCCGTCT TTATCCGCAA CATCCTGCTG
CGCGACTTCG ATGCGGCGCT GGAGACGATC TACGAATCGA GCGTCTTCCC GTCGATCTGC
GGCCGCGTCT GCCCGCAGGA GACGCAATGC GAGGCGCAGT GCATCATCCG CCGCTACAAG
AAGCACGAGC CGGTCGCGAT CGGCCGTCTC GAACGCTTCG TCGGCGATAA CGCGCGCGCG
CCCAAGGGCA AGCCGATCGA CCTGTCCAAC ACCATCGGCA AGGTGGCGAT CGTCGGCTCC
GGCCCCGCAG GCCTCGCCGC CGCGGCAGAT CTCACGCGTT ACGGCGTGGA GACGACGGTG
TACGAAGCCC TGCATGTGCT GGGCGGCGTG TTGCAATACG GCATCCCGTC GTTCCGGCTG
CCGCGCAACA TCATCGACCG CGAAATCCAG CGCCTGAAGG ACATCGGCGT CAAATTCGAA
ACCAACAAGG TGGTCGGCAA GACTTTCACC ATCGACCAGC TGATGAACGA CCGCGGCTAC
GATGCGATGT TCGTTGCGGC GGGCGCCGGC GCGCCGACCT TCCTCGGTAT CCCCGGCGAA
TTCGCCGGCC GGGTCTATTC GGCGAATGAA TTCCTCACCC GCATCAATCT GATGGGCGGC
GACAAATTCC CTTATCTCGA TACGCCGGTC AGCGTCGGCC AGAGCGTGAT CGTGATCGGC
GCCGGCAATA CGGCGATGGA CTGCCTGCGC GTGGCGCGCC GCATCGGCGC TGCGACGGTG
CGCTGCGTCT ATCGCCGGTC GGAAGCCGAG GCGCCGGCGC GTATCGAGGA AATCCGCCAC
GCCAAGGAAG AGGGCGTCGA TTTCTTCTTC CTGCATTCCC CGGTAGAGAT CCTCGTCACC
GAAGCTGGCG TCGTGCGCGC GGTGCGGCTA CAGAAGATGG AGCTCGGCGA GCCCGACGAG
CGCGGCCGCC GCAAGCCGAT CGCGCTCGAC GAATTCATCG AGCTCGAATG CGACACGGTG
ATCTATGCGC TCGGGACCAA GCCGAATCCG ATCATCGGCC AGGCAACGCC TGGGCTTGCC
CTGAACAAAT GGGGCAACAT CGCCGCCGCT GACGACACCC AGTCCACCAA CATGCCGGGG
GTGTTCGCCG GCGGCGACAT CGTCACCGGT GGCGCCACGG TCATTCTGGC GATGAGCGCG
GGGCGCCGCG CCGCGAAATC GATCGCGGCC TGGCTGCGAT TGAACAAGAG CAAGTGGCCC
ATCACGGCGC AGGAGGCGGA CGACTTCGTC GCCGGAAAAC TGGCGCCGCC GATCGAGGAG
GATGGCGTGG CGCATTGTCC GAAATGTCAC CAGCCGCTGG AGAGCTCAGA GGAATACATC
TGCTGCGCCG AATCCGAGCT GCAATGGCGC TGCGACGATT GCGCCAAGGT GAGCGAAGGG
TTTGCGTTCC CCTACGGCAT GTGCCCGCAT TGCGGCGGCA AGCTGCAGGC GCTGCATCGC
CCCGAGGTGA GCGACGAAGC CGGTCTGGCG GCTATTCGCA CCGCTTTCGA AATCGAACTC
GGCGGCCGCG CGTTCTATAC CAAGGCCGCC AAGGAAACCT CGGATACGAC CTTGCAGGAG
CTGTTCCTGT CCTTCGCCGG GATGGAAGAG GAACACATGA CGACGCTGGC GCAGCGCTAT
CACATCGCGT TGCCGGACGC CGCGGTGGGC TTCCATCTCG GCACGGCGGC GATCATGGCC
GGCGTCAAAG GCAAGATCGA CGATCCCGTC ACGCTGTTCC AGGCGGCGAT CGAGTTCGAA
CGCCGTGCCG CCGCCTTCTT CAAGACCCGC GTCGACGAGA CGCCGGATGG ATCGGTCGAA
CGGCAACTGT ATCGCGAACT CGCCGCCGAG GAGGACGAGC ACGTCGCCGT GCTGCAGACC
GAATTCGCGC GCTGGCAGGA AGGCAAGCGC GGCCTGCTCA CCTAG
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| Protein sequence | MYQIVRREQF SDTTFLWDVE APDIAASAEP GHFVMLRLYD GAERIPLTVA DFDRKKGLVT
IVVQALGKTT REMRDKFKTG DTFEDFVGPL GLPQHIDKAG HVVFVGGGLG VAPIFPQLRA
FKEAGARTTA IMGFRSKDLV FWEDKFREYA DELIICTDDG SYGEPGFVTA ALKRVVEEQK
PDKVVAIGPM PMMHACVETT RPFGVKTMVS LNTIMVDGTG MCGSCRVTVG TEVKFACVDG
PDFDGHLVDF KELHARQNRF KTEEDKANEH FAHVCNLEKQ LIVDGKRNYK KLATLAPHQT
PMPERNAQDR ATNFKEVNLG YSVEEALREA ERCIQCIEPT CIAGCPVGID IPVFIRNILL
RDFDAALETI YESSVFPSIC GRVCPQETQC EAQCIIRRYK KHEPVAIGRL ERFVGDNARA
PKGKPIDLSN TIGKVAIVGS GPAGLAAAAD LTRYGVETTV YEALHVLGGV LQYGIPSFRL
PRNIIDREIQ RLKDIGVKFE TNKVVGKTFT IDQLMNDRGY DAMFVAAGAG APTFLGIPGE
FAGRVYSANE FLTRINLMGG DKFPYLDTPV SVGQSVIVIG AGNTAMDCLR VARRIGAATV
RCVYRRSEAE APARIEEIRH AKEEGVDFFF LHSPVEILVT EAGVVRAVRL QKMELGEPDE
RGRRKPIALD EFIELECDTV IYALGTKPNP IIGQATPGLA LNKWGNIAAA DDTQSTNMPG
VFAGGDIVTG GATVILAMSA GRRAAKSIAA WLRLNKSKWP ITAQEADDFV AGKLAPPIEE
DGVAHCPKCH QPLESSEEYI CCAESELQWR CDDCAKVSEG FAFPYGMCPH CGGKLQALHR
PEVSDEAGLA AIRTAFEIEL GGRAFYTKAA KETSDTTLQE LFLSFAGMEE EHMTTLAQRY
HIALPDAAVG FHLGTAAIMA GVKGKIDDPV TLFQAAIEFE RRAAAFFKTR VDETPDGSVE
RQLYRELAAE EDEHVAVLQT EFARWQEGKR GLLT
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