| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1004 |
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| Symbol | |
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| ID | 3969691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1103071 |
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| End bp | 1104774 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637924121 |
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| Product | hypothetical protein |
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| Protein accession | YP_530893 |
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| Protein GI | 90422523 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0319616 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTGG TTTTTAGAGG CCGTGCAACT AGACGCACGA AGCCGTCCCC CCTAGACGAG
GGCGACGTAC TTGAGCTGCT TGCCAACGAT TGGGACGATT TCGGTTTTGG CACTCTCTTT
GGCGTCACTT GCCGCGTAGG CGAGGTCTCA CTTGATCTAG ATTATCTGAG GTTGCTAGTT
GAGGACGAAA ATCCGAGCCG CGTCAAACTA CAACAATTGT TGAGCGACGG GTGGGATGGC
AACTTCCCGA TTCCTGACAC AAACTACATT TCGGTTCCGT CCGACATCTC GTTCTATCAG
CAGCTCGAGG GCGTGATCGG CATCGAACGG ACCATCGACG TCGCGCTCGC GCTTCGCGAT
GCCAGCTATC TCGTGAACGT CGTCAGGGAC GAGATTGCCG TCGCCCTGAC CCAAACCACC
GGCTTTGGAC GCTCTCTCCA ACGCGAACGT GGAAGTATCA AAGCGTATTT CGACGGCTGG
CGTGTCCTCG ATAATCAGCA CATCGCGGTT CTTGATCTCG GATTTGCATT TGAGAACGTG
TTCGGAGAGC GATCAGCGCT CGATCTGAAA TACCAATCAA GCAGCCCGTT TCCTCACGAC
ATAAACGTCC TGATTGGCCC CAATGGGCAC GGAAAATCCC AAGTTCTTCA TCAGATGGTT
CGGGACTGGA TATCGCCTAG CGACGACACC GAGTTCGGGT TCGTCCGTAA GCCAAACCTC
AGCCGGATGG TGGTCGTCTC GTACAGTCCT TTCGAGCATT TCCCAGTCGA CCTCGCGGGG
AAGCGCTTGA AGGACGTTGA TGCCTACAAG TATTTCGGCT TTCGCGGCCG CCGTGCTCCG
TCGGAAGCCA ACAGGCGCGG CCGGATCGCG CTTTCGCACG AATTTCCGAA GAGGGATGCT
GCGCGCTCGC TCCTCGATTG CCTCAGCGAT GATCAGAAAT ATCAGTCCAT TAGGGATTGG
GCGAACAAGG TGCAGACAGT CGAGGGTGTC TTGCGTAGCG CCATCGACTT CGATTTCGCC
ACCGTGGAGA TTCCTTTGGC GCGCCGCGCC CGATCGCTAT TCGCGGCGGA CACGACTGTA
GAGCCACTGA GCATTATGAC CGGCGATGAC GAAGAGCGCC GTCAGTTCCT GCCAATCGCG
TCTGATCGAA TAGGCGTTCT AGACGCCGCG AAAGTGTTGG ATTCGCTTGT CGAAGAATCC
GGTGTTACTT TCTTCAAAGA TGAGGAGCCG ATCGAGCTGA GCTCCGGCCA ACGGCTCTTC
GCGTACATCG TGATCAACAT TCTCGGCGCT ATCAAGAGGA ACAGCCTTAT CCTGGTCGAC
GAGCCGGAGT TGTTCCTGCA CCCGACGCTG GAGGTTCAGT TCGTGGGCAT GCTGAAGCGA
ATCCTGAAAA GCTTCAACTC GAAGGCCCTG TTGGCGACCC ATTCCGTAGT GACGGTACGC
GAGGTGCCAG CGGACTGCGT CCACGTGTTC GACAAGGGCG AGGATTTTCT ACTGGTCCGT
CATCCGCCCT TTCAGACATT CGGCGGTGAC ATACAGCGCA TATCGTCCTA CGTGTTTGGC
GACAGTCATG TCTCCAAACC GTTCGAGGAC TGGATTACGG AGCAACTTGC GGAGTTCGGC
TCGGCGGACG AGTTGCTCGC GGCCCTTGGT GACGGGGTCA ACGAGGAGCT CATCGTGCGG
ATCAGGGCCA CGGGGCGCGA ATAG
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| Protein sequence | MRVVFRGRAT RRTKPSPLDE GDVLELLAND WDDFGFGTLF GVTCRVGEVS LDLDYLRLLV
EDENPSRVKL QQLLSDGWDG NFPIPDTNYI SVPSDISFYQ QLEGVIGIER TIDVALALRD
ASYLVNVVRD EIAVALTQTT GFGRSLQRER GSIKAYFDGW RVLDNQHIAV LDLGFAFENV
FGERSALDLK YQSSSPFPHD INVLIGPNGH GKSQVLHQMV RDWISPSDDT EFGFVRKPNL
SRMVVVSYSP FEHFPVDLAG KRLKDVDAYK YFGFRGRRAP SEANRRGRIA LSHEFPKRDA
ARSLLDCLSD DQKYQSIRDW ANKVQTVEGV LRSAIDFDFA TVEIPLARRA RSLFAADTTV
EPLSIMTGDD EERRQFLPIA SDRIGVLDAA KVLDSLVEES GVTFFKDEEP IELSSGQRLF
AYIVINILGA IKRNSLILVD EPELFLHPTL EVQFVGMLKR ILKSFNSKAL LATHSVVTVR
EVPADCVHVF DKGEDFLLVR HPPFQTFGGD IQRISSYVFG DSHVSKPFED WITEQLAEFG
SADELLAALG DGVNEELIVR IRATGRE
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