Gene RPC_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1001 
Symbol 
ID3969688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1099996 
End bp1100829 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content60% 
IMG OID637924118 
ProductIstB-like ATP-binding protein 
Protein accessionYP_530890 
Protein GI90422520 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0045417 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGACGC GCGACAACAC ACCAGCGCCC ATCACGGTCG ATCTCGCTCG CCTGCCGATG 
CTGCTGACCT CCCTGCGGCT GCCGACCATC GGCCAAATGT GGGCGGACCT CGCCGAGCGT
TCAGACCGCG AAGGCTGGCC GGCCGCTCGC TATCTTGCGG CCTTGCTCGA GCACGAGCTT
GCCGAACGCT ATCAACGTCG AATCCAGCGC AACATGCAGG ACGCTCACCT GCCGGCGGGG
AAGAGCTTCG CCACCTTCGA CTTCGCCGCC GTCCCGATGA TCAACAAGAG CCAGATCACC
GCGCTCGCGG CCGGCGGTTC TTGGCTCGAC AAAGGCGCCA ATCTATTGGC CTTTGGCCCG
CCAGGCGTTG GCAAGTCGCA TCTCGGCGCA GCTCTCGGCC AGGCTCTCAT CGAAAACGGC
TATCGTGTTC TGTTCACCCG CACGACCGAC ATGGTGCAAC GACTTCAGGC CGCTCGCCGC
GATCTAACGC TGCAAAACGT CATGGAAAAG CTCGACAAAT ACGACCTGCT CATCCTCGAT
GACCTCTCTT ACGTCCGCAA GGATCAGGCC GAAACCAGCG TGCTCTTCGA ACTCATCTCC
GCCCGTTACG AGCGTCGCAG CTTGCTCATT ACAGCTAATC AGCCATTCGG GGGCTGGGAG
GAAATCTTCC CCGACAAGGC AATGACCGTG GCCGCCATCG ACCGCCTCGT GCACCACGCC
GTCATTCTGG AAATGAACAC CGACAGTTAT CGTCGCAAGG CCGCAGTCAC GCGAATGACC
GATCGGAAGG CCTCGGAAAA CTCAAAGCAA AAGCCTGTAA CCAAAACGAT CTAA
 
Protein sequence
MLTRDNTPAP ITVDLARLPM LLTSLRLPTI GQMWADLAER SDREGWPAAR YLAALLEHEL 
AERYQRRIQR NMQDAHLPAG KSFATFDFAA VPMINKSQIT ALAAGGSWLD KGANLLAFGP
PGVGKSHLGA ALGQALIENG YRVLFTRTTD MVQRLQAARR DLTLQNVMEK LDKYDLLILD
DLSYVRKDQA ETSVLFELIS ARYERRSLLI TANQPFGGWE EIFPDKAMTV AAIDRLVHHA
VILEMNTDSY RRKAAVTRMT DRKASENSKQ KPVTKTI