Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0996 |
Symbol | |
ID | 3969683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1090686 |
End bp | 1090955 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637924113 |
Product | conjugal transfer TraD |
Protein accession | YP_530885 |
Protein GI | 90422515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000550634 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCAGTT GGCAGGTCGA GCGGCGCAAA CGCACGCGGC GTCTGATCGA ATTGGGGGGC CTCGTCGTCA AAGCTCGTGT CGTGGACCTG AGCGGCGATG ATCGCGCTAT TATCCTCGGC GCGCTGCTCT GGATGGCAGA CAAGCTCAAA AGCAATCAAG GCGAACACGC CCGAGCGCTC TGGGCCGCAA TGGGAAAGAA GGCATTCGCT TTGGAACGGG CGACAGAAAA GCCCACCATC CCGCAGGAAT GGCCGCGAGA TCGGGCATGA
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Protein sequence | MRSWQVERRK RTRRLIELGG LVVKARVVDL SGDDRAIILG ALLWMADKLK SNQGEHARAL WAAMGKKAFA LERATEKPTI PQEWPRDRA
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