| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0993 |
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| Symbol | |
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| ID | 3969680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1086852 |
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| End bp | 1087058 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924110 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_530882 |
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| Protein GI | 90422512 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000350598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000494305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCCGAAC CAGACCGTAT CATCCGTCTG AAAACCGTTC TCGCCCGCGC CGGCCTGTCC
AGGTCCACCA TCTACCGCAA GATCGCCGAG GGCACATTCC CGGCTCAGCT CAGAATCAGC
AGCAACGGCG CAGGCTGGCG CGAATCCGAA ATCAACCGCT GGGTCGCCAA TCCTGTCGCA
TGGCGACCAC GGGGCGATTT CGAATAG
|
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| Protein sequence | MPEPDRIIRL KTVLARAGLS RSTIYRKIAE GTFPAQLRIS SNGAGWRESE INRWVANPVA
WRPRGDFE
|
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| |