| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0984 |
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| Symbol | |
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| ID | 3969708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1077236 |
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| End bp | 1078045 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637924100 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_530873 |
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| Protein GI | 90422503 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000226187 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAGGC TACGTCTTGC AATTTTGCTG CTGGCGCTCG GCGCCGCGGC TCCGGCTCAG
GCGGCGTCCT GCGGCGGCGA CTTCCAGACC TTCGTCGCCA GCATCTCGCG CGAGGCCGCG
GCGCAGGGGA TTTCGCAAGG CGTGATCGCC CAGGCGCTGG GCGGAGTCAC CCAGGATCCC
GCGGTGCTGT CGTTCGACCG CCGCCAGCGC GGCACCTTCA ACAAGAGCTT CGAGCAATAT
GTCTCGACCC GGGTCGGCCC CGGCCGGATC AAGACCGGGC AGGCGATGTT GATCCGCCAT
GCCTCGCTGT TGTCGCGGAT CGAACGGCAG TTCGGCGTGC CGCCGCAGAT TCTGGTGGCG
ATTTGGGGCC TGGAGACCGA TTACGGCACC GGCGATATGG GCAAGCTGCC GGTATTCCGG
GTGCTGGCGA CGATGGCGCA TGATTGCCGC CGCACCGAAT TGTTTCAGGG CGAGCTGTTG
GCGGCGCTGC AGATCGTGCA GCGCGGCGAC CTCGGGCTGC GCGACATGGT CGGCGCCTAT
GCCGGCGAAA TCGGCCAGAC CCAGTTTCTG CCGTCGTCCT ACATCAAATA CGGCGTCGAT
TTCGACGGCA ACGGCCACGT CGACCTGCGC CACAGCGTGC CGGACGTGCT GGCCTCCACC
GCCAACCTGT TGAAGACCGC GGGGTGGCGC GCCGGCGGCT CCTACGAAGA GGGCTCGGCG
AATTTCGAGG CGATGCGCGA GTGGAACAGG GCGACGATCT ATCGCAAGAC CATCGGCTAT
TTCGCCGACC GGCTGGCGCG CGGCGGCTAG
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| Protein sequence | MIRLRLAILL LALGAAAPAQ AASCGGDFQT FVASISREAA AQGISQGVIA QALGGVTQDP
AVLSFDRRQR GTFNKSFEQY VSTRVGPGRI KTGQAMLIRH ASLLSRIERQ FGVPPQILVA
IWGLETDYGT GDMGKLPVFR VLATMAHDCR RTELFQGELL AALQIVQRGD LGLRDMVGAY
AGEIGQTQFL PSSYIKYGVD FDGNGHVDLR HSVPDVLAST ANLLKTAGWR AGGSYEEGSA
NFEAMREWNR ATIYRKTIGY FADRLARGG
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