| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0982 |
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| Symbol | |
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| ID | 3969706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1075627 |
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| End bp | 1076190 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924098 |
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| Product | peptidase C56, PfpI |
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| Protein accession | YP_530871 |
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| Protein GI | 90422501 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0693] Putative intracellular protease/amidase |
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| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000702113 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGGCC AACTCGACGG CAAACGCGTG CTCATTCTCG CCACCAACGG CTTTGAGCAA
TCGGAACTCG AAGTGCCGCG CGACCGGCTC ACCGCTGCCG GCGCCAAGGT GGAGATCGCC
TCGCCGGAAA CCGGCGAGAT CAAAGGCTGG GACGAGAAAG ATTGGGGTCG GCCGGTGAAG
GTCGACAAGG CGCTCTCGGC GGCGAAGGCC GACGATTACG ACGCGCTGGT GCTGCCCGGC
GGCCAGATCA ATCCGGATCT GTTGCGCGTC AACGCCGAGG CGCTGAAGCT GATCAAGGCG
TTCTATGACG GAGGCAAGGT GGTGGCGGCG GTGTGCCACG CGCCCTGGCT GTTGATCGAG
ACCGGGATCG CCAAGGGCAA GAAGATGACC TCGTATCACG CGATCAAGAC CGACGTGATC
AACGCCGGCG CGCAGTGGGA GGATTCTTCG GTGGTCACCG ACCAGGGCGT GATCACCTCG
CGCAACCCCG GCGACCTCGA AGATTTTTCC AACAAGATCA TCGAGGAGAT CCGCGAAGGC
CGCCACCAGC GCCGCGCCGC GTAA
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| Protein sequence | MAGQLDGKRV LILATNGFEQ SELEVPRDRL TAAGAKVEIA SPETGEIKGW DEKDWGRPVK
VDKALSAAKA DDYDALVLPG GQINPDLLRV NAEALKLIKA FYDGGKVVAA VCHAPWLLIE
TGIAKGKKMT SYHAIKTDVI NAGAQWEDSS VVTDQGVITS RNPGDLEDFS NKIIEEIREG
RHQRRAA
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