| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0980 |
|---|
| Symbol | |
|---|
| ID | 3969704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1072931 |
|---|
| End bp | 1073254 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637924096 |
|---|
| Product | cupin 2, barrel |
|---|
| Protein accession | YP_530869 |
|---|
| Protein GI | 90422499 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000531927 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTGA TGGATCTGCT CGAGCAACTG CCGCCGCCGG GGCCGGACGA AGCCCTGGAG
ACGCTGCTGT CGCGCGACGG TGTTCGCTTC GAGCGCATCG TCTCGACCGG GCAGGCGAGC
CCGCCGGGGT TCTGGTACGA TCAGGCCGAG ACCGAAGTCG TGGTGCTGCT GGCGGGGGCG
GCAACGCTGC GCTTCGAAGA AGGCGACCGG CTGATCGAGC TGCGTCCCGG CAGCCTGGTG
GAAATTCCCG CCCATGCCCG CCACCGCGTC GAGGCGACGC AAGCCGATCC GCCGACGGTG
TGGCTGGCGG TGTTCTTTCG GTGA
|
|---|
| Protein sequence | MFVMDLLEQL PPPGPDEALE TLLSRDGVRF ERIVSTGQAS PPGFWYDQAE TEVVVLLAGA
ATLRFEEGDR LIELRPGSLV EIPAHARHRV EATQADPPTV WLAVFFR
|
|---|
| |