| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0967 |
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| Symbol | |
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| ID | 3969730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1061365 |
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| End bp | 1062270 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924083 |
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| Product | transglutaminase-like |
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| Protein accession | YP_530856 |
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| Protein GI | 90422486 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.816278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00428968 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTGCTT CACAGATGCC GCTGCTGACC ATCCATCACA AGACCGAATA CCACTATTCC
CATCCGGTGG CGTTCGGCGA ACACCGCATC ATGCTGCGGC CGCGCGACGG CCACGATCTG
CGGGTACTGA AAGGCCAGCT GGATATCTCG CCGCCGCCGA TGTCGCTGCG CTGGATCCAC
GACGTGTTCG GCAACAGCGT GGCGATCGCC ACCTTCGACG AACGCGCCAC CACGCTCAGC
TTCAACTCCG TCGCCACCGT CGAGCACGCG CCGACCGACG AGTTCGCGCT GACGCCGGAC
GACGCCGCCT ATTTCTATCC GTTCCGCTAC GACGACGACG AGTTTCCCGA TCTGGTGCAA
TTCGTCCGCC CGCAATATGG CGACCCCCAC GGCGAACTCT CGACCTGGGC GCGCGGCTTC
CTCGACGTCG AGGGGCCGAC GCCGACCTTC AAGATCTTGA GCGAGATGAC CCACGGCATT
CGCGCCAACT TCAGCTATCG CAAGCGCCAC GAGCGCGGCA CCCAGCATCC GCTGGATACG
CTGCAGACCG GCTCCGGCAC CTGCCGCGAT TTCGCGCTGC TGATGATCGA GGCGCTGCGA
AGGCTCGGCA TCGCCGCGCG GTTCGTCTCC GGCTATCTGT TCGTGCACGG CGACCGCGAG
CACGGCTATG TCGGCGGCGG CTCGACGCAC GCCTGGGTGC AGGTCTATCT GCCGAGCGCC
GGCTGGATCG AATTCGATCC GACCAACGGC ATCGTCGGCA GCCGCGACCT GGTGCGCGTC
GCGGTGGCGC GCGATCCCTG CCAGGCGATC CCGCTGCACG GCAGCTATCT CGGCGGCGCC
GACGAATTCA TCGGGATGGA CGTCACCATC CGCGTGGTCT CAGCCGGCGA GCCGGAGAGG
GAGTAG
|
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| Protein sequence | MIASQMPLLT IHHKTEYHYS HPVAFGEHRI MLRPRDGHDL RVLKGQLDIS PPPMSLRWIH
DVFGNSVAIA TFDERATTLS FNSVATVEHA PTDEFALTPD DAAYFYPFRY DDDEFPDLVQ
FVRPQYGDPH GELSTWARGF LDVEGPTPTF KILSEMTHGI RANFSYRKRH ERGTQHPLDT
LQTGSGTCRD FALLMIEALR RLGIAARFVS GYLFVHGDRE HGYVGGGSTH AWVQVYLPSA
GWIEFDPTNG IVGSRDLVRV AVARDPCQAI PLHGSYLGGA DEFIGMDVTI RVVSAGEPER
E
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