Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0966 |
Symbol | |
ID | 3969729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 1060477 |
End bp | 1061292 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637924082 |
Product | N-formylglutamate amidohydrolase |
Protein accession | YP_530855 |
Protein GI | 90422485 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3931] Predicted N-formylglutamate amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.537929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00437217 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGCCC CCATGATTCA GGACAATGCG CGCGCGTCTG ATCTACGCTT CGGAACCGCG GATGTTCCGG TGATCGAGAG AAATGTGGCG GGCCGCTCGC CTTTACTTCT GACCTGCGAT CACTACGGTC GCGCGATCCC GCCGCAGCTC GACAATCTCG GCGTCGCGCC CAGCGAACTC GAGCGCCATA TCGCCTGGGA CATCGGTATC GCCGGGGTCG CGGAAAGACT GGCGGCGGCG CTCGACGCGC ATCTGATCGC GCAACGCTAC TCGCGACTGG TGATCGACTG CAACCGCCCG CCGCGATCGG CGAGTTCGAT TCCGCTGGTC AGCGAATCGA CCTTCATCCC CGGCAATCAG GGGCTGACGC AGGACCAGGC CGCGGAGCGG CGGCAATTGA TCTTCGATCC TTATCACCGG CGGATCAATC AGGCGATCGA CGCCCGGCTC GCCGCAGGCC GGGCCACCGT GCTGGTGTCG CTGCACAGCT TCACGCCGAG CTATGCCGGC GTCGCCCGGC CCTGGCACAT CGGCACGCTG TACAACCGCG ATACCGTGCT GCCGCCGCTG TTGCTCAAGG CGCTGCGCGA AGAGGCCGAG CTGGTGGTCG GCGACAACGA GCCTTACGGC GTCGACGACG CCACCGACTA CACCATTCCG GTGCATGGCG AGCAGCGCGG GTTGATCAAC AGCGGCATCG AGATCCGCCA GGATTTGATC GAGAGCGAGG CGGGCCAGGC GCAATGGGCG GAGCGGCTGG CGCGGGCGCT CAGCGAGATC GAGGCGACGC TGCACGGGCG AGGGCTGATC GGTTAG
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Protein sequence | MSAPMIQDNA RASDLRFGTA DVPVIERNVA GRSPLLLTCD HYGRAIPPQL DNLGVAPSEL ERHIAWDIGI AGVAERLAAA LDAHLIAQRY SRLVIDCNRP PRSASSIPLV SESTFIPGNQ GLTQDQAAER RQLIFDPYHR RINQAIDARL AAGRATVLVS LHSFTPSYAG VARPWHIGTL YNRDTVLPPL LLKALREEAE LVVGDNEPYG VDDATDYTIP VHGEQRGLIN SGIEIRQDLI ESEAGQAQWA ERLARALSEI EATLHGRGLI G
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