Gene RPC_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0966 
Symbol 
ID3969729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1060477 
End bp1061292 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID637924082 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_530855 
Protein GI90422485 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3931] Predicted N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.537929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00437217 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCCC CCATGATTCA GGACAATGCG CGCGCGTCTG ATCTACGCTT CGGAACCGCG 
GATGTTCCGG TGATCGAGAG AAATGTGGCG GGCCGCTCGC CTTTACTTCT GACCTGCGAT
CACTACGGTC GCGCGATCCC GCCGCAGCTC GACAATCTCG GCGTCGCGCC CAGCGAACTC
GAGCGCCATA TCGCCTGGGA CATCGGTATC GCCGGGGTCG CGGAAAGACT GGCGGCGGCG
CTCGACGCGC ATCTGATCGC GCAACGCTAC TCGCGACTGG TGATCGACTG CAACCGCCCG
CCGCGATCGG CGAGTTCGAT TCCGCTGGTC AGCGAATCGA CCTTCATCCC CGGCAATCAG
GGGCTGACGC AGGACCAGGC CGCGGAGCGG CGGCAATTGA TCTTCGATCC TTATCACCGG
CGGATCAATC AGGCGATCGA CGCCCGGCTC GCCGCAGGCC GGGCCACCGT GCTGGTGTCG
CTGCACAGCT TCACGCCGAG CTATGCCGGC GTCGCCCGGC CCTGGCACAT CGGCACGCTG
TACAACCGCG ATACCGTGCT GCCGCCGCTG TTGCTCAAGG CGCTGCGCGA AGAGGCCGAG
CTGGTGGTCG GCGACAACGA GCCTTACGGC GTCGACGACG CCACCGACTA CACCATTCCG
GTGCATGGCG AGCAGCGCGG GTTGATCAAC AGCGGCATCG AGATCCGCCA GGATTTGATC
GAGAGCGAGG CGGGCCAGGC GCAATGGGCG GAGCGGCTGG CGCGGGCGCT CAGCGAGATC
GAGGCGACGC TGCACGGGCG AGGGCTGATC GGTTAG
 
Protein sequence
MSAPMIQDNA RASDLRFGTA DVPVIERNVA GRSPLLLTCD HYGRAIPPQL DNLGVAPSEL 
ERHIAWDIGI AGVAERLAAA LDAHLIAQRY SRLVIDCNRP PRSASSIPLV SESTFIPGNQ
GLTQDQAAER RQLIFDPYHR RINQAIDARL AAGRATVLVS LHSFTPSYAG VARPWHIGTL
YNRDTVLPPL LLKALREEAE LVVGDNEPYG VDDATDYTIP VHGEQRGLIN SGIEIRQDLI
ESEAGQAQWA ERLARALSEI EATLHGRGLI G