| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0964 |
|---|
| Symbol | |
|---|
| ID | 3969727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1058318 |
|---|
| End bp | 1058935 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637924080 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_530853 |
|---|
| Protein GI | 90422483 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0177449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTGC AAGTCTATCT CGCTTATCTC GCCGCCTGCG TCGCGCTGGC GCTGTTGCCC
GGTCCGATGG TGACGCTGGT GATCGCCAAC GGGCTGCGCC ACGGCACCCG CCCGGCGCTG
ACCAACATCG CCGGCGCGCA GCTCGGCTTC ACCATCGTGA TCGGCATCGT GGCGGTCGGG
CTGACCTCGC TGATGGCGAC GATGGGCTAT TGGTTCGATT GGGTGCGGCT GGCCGGCGCC
GCCTATCTGA TCTGGCTCGG CATCGCGCTG ATCCGCGCGC CGGTGCACGC GCTGGATGCC
GACACGCCGC CGCCGCCGCC GCGCGGCGGT TTTTTTCTGC AGGGGCTGTT GGTGCTGCTC
AGCAATCCGA AAGTGCTGGT GTTCTTCGGC GCCTTCATTC CGCAATTCGT CGACATGGAG
AAGGATCACT TCCCGCAGGT GGCGCTGCTC GGCGCCACCT TCATGGTGAT CGCCGGCGTC
ACCGACGCGA TCTACGCGGT GCTGGCCGGC CGCGCGCGAC GGTTCTTCTC GGCGCGCCGC
ACCAAGCTGC TGTCGCGGAT CTCCGGCGGC TTCCTGATCG GCGGCGGGCT GTGGCTGGCG
CTGTCGCGGG CACGGTGA
|
|---|
| Protein sequence | MSLQVYLAYL AACVALALLP GPMVTLVIAN GLRHGTRPAL TNIAGAQLGF TIVIGIVAVG
LTSLMATMGY WFDWVRLAGA AYLIWLGIAL IRAPVHALDA DTPPPPPRGG FFLQGLLVLL
SNPKVLVFFG AFIPQFVDME KDHFPQVALL GATFMVIAGV TDAIYAVLAG RARRFFSARR
TKLLSRISGG FLIGGGLWLA LSRAR
|
|---|
| |